Gene Information

Name : Psed_2869 (Psed_2869)
Accession : YP_004332922.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3034030 - 3035448 bp
Length : 1419 bp
Strand : +
Note : TIGRFAM: Pyruvate kinase; KEGG: ami:Amir_5687 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like

DNA sequence :
GTGAGTCGCCGAACCAAGATCGTCTGCACCATCGGCCCCGCGACCGCCTCGCCGGAGCGGATCCGGGAGCTGGTCGCGGC
CGGGATGGACGTCGCAAGGCTCAACTTCAGCCACGGCAACCGCGAGGACCACAAGCGGGTCTACGAGATGGTCCGCGAGG
CCGCGGACGCGGAGGGTCGCGCGGTGGGCGTGCTGGCCGACCTCCAGGGTCCGAAGATCCGCCTCGGCCGGTTCGCCGCC
GGCCCCACCGAGTGGCACACCGGTGAGGAGGTCCGGATCACCGTCGAGGACGTCGCCGGCACGCACGACCGGGTGTCGAC
GACCTACGGCGGCCTCGCCACCGACGCCCGCGCGGGCGACCGGCTGCTGGTCGACGACGGCAAGGTGGGCCTGCGGGTGG
TCGCCGTCGAGGGCCTCGACGTGGTCTGCAAGGTCACCGAGGGTGGCCCGGTCAGCGACAACAAGGGCATCTCGCTGCCC
GGGATGAACGTGTCGGTGCCCGCGATGAGCGAGAAGGACTCGGCCGACCTCGCGTTCGCGCTGGACCTGCGCGTCGACAT
CGTGGCGCTGTCGTTCGTGCGCAGCCCCGCCGACATCGAGCAGGTCCACAAGATCATGGACCAGCACGGCGGGCGCCTGC
CGGTCGTCGCGAAGCTGGAGAAGCCCGAGGCCGTCGACAACCTCGAGGCGATCGTGCTGGCCTTCGACGCGATCATGGTC
GCGCGTGGTGACCTGGGCGTCGAGCTGCCGCTGGAGAACGTGCCGCTGGTGCAGAAGCGGGCGATCCAGATCGCGCGGGA
GAACGCCAAGCCGGTGGTCGTCGCCACGCAGATGCTCGACTCGATGATCACCAACTCGCGCCCGACCCGCGCGGAGGCCT
CCGACGTCGCCAACGCGGTGCTCGACGGCGCCGACGCGGTGATGCTGTCCGGCGAGACGAGCGTCGGCCGCTACCCGATC
AAGTCGGTGCGCACGATGGCGCAGATCATCGAGGCGGTCGAGGCCGGCCCGACGACGGTGCCCCCGCTCAACCACGTGCC
CCGCACCAAGCGCGGGGTGCTGTCGTACGCGGCACGCGACATCGGGGAGCGGCTCTCGGCCCGGGCGCTGGTCGCGTTCA
CACAGTCCGGCGACACGGTGCGCCGGCTCGCCCGGCTGCACACCCGGCTGCCGCTGCTCGCCTTCACCCCGACGCCGGAG
GTGCGCAGCCAGCTGGCGATGACGTGGGGCGTCGAGACGTTCCTGGTGCCCTACGTCGAGTCGACCGACGCGATGGTCCG
CCAGGTCGACCACTCGATGCTCGCGCTCGAGCGGTTCCAGCCCGGCGACCTGGTGGTCATCGTCGCGGGCTCCCCGCCCG
GGACCGTCGGGTCGACGAACTCGATCCGGGTGCACCGGCTGGGCGAAGAGGACATCTGA

Protein sequence :
MSRRTKIVCTIGPATASPERIRELVAAGMDVARLNFSHGNREDHKRVYEMVREAADAEGRAVGVLADLQGPKIRLGRFAA
GPTEWHTGEEVRITVEDVAGTHDRVSTTYGGLATDARAGDRLLVDDGKVGLRVVAVEGLDVVCKVTEGGPVSDNKGISLP
GMNVSVPAMSEKDSADLAFALDLRVDIVALSFVRSPADIEQVHKIMDQHGGRLPVVAKLEKPEAVDNLEAIVLAFDAIMV
ARGDLGVELPLENVPLVQKRAIQIARENAKPVVVATQMLDSMITNSRPTRAEASDVANAVLDGADAVMLSGETSVGRYPI
KSVRTMAQIIEAVEAGPTTVPPLNHVPRTKRGVLSYAARDIGERLSARALVAFTQSGDTVRRLARLHTRLPLLAFTPTPE
VRSQLAMTWGVETFLVPYVESTDAMVRQVDHSMLALERFQPGDLVVIVAGSPPGTVGSTNSIRVHRLGEEDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_2869 YP_004332922.1 pyruvate kinase VFG0479 Protein 2e-75 41