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Name : Psed_0246 (Psed_0246) Accession : YP_004330374.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4779 EC number : - Position : 264813 - 265898 bp Length : 1086 bp Strand : - Note : PFAM: ABC transporter permease; KEGG: rer:RER_31070 iron-siderophore ABC transporter permease DNA sequence : GTGAAGCTGCTCGAGGCCGACGACGTGCTGATCCCCGGCCGCACCCCCGTGCGCTACCGCAGGTTCTCCGGCGTGTGGCG GCCCCGGATCGTGCTGGTCACCCTGCTGGGCCTGGCCGCGACGCTGCTCATGCTGGCCGTCAACGTCGGCCTCGGGGAGT ACCGCATCGGGGTCCTCGACGTGCTGCGCGTGCTCCTCGGCGGCGGCGACCCCGGCCAGCAGTTCGTCGTACTCGACCTC CGCCTCCCGCGCTCGCTGACCGCGGTGTTCGTCGGCGCCGCGCTCGGGCTGTCCGGGGCGATCACGCAGACCGTCACCCG CAACGCGCTCGCGAGCCCCGACATCCTCGGCATCACGACGGGCGCCTCGACGACCGCCGTCGCCGTCATCGTGCTCGGCG GCAGCTTCCCGCTCGCGACCTGGCTCTGGGGCACGGGCAGCCTGCCGTTCGCGGCACTCGTGGGCGGGCTGCTCACCGCG CTCGTGATCTATGCGCTCGCCTGGCGCAAGGGGGTGGAGGGCAACCGGCTGATCCTCGTCGGCGTCGGTGTCGGGGCCGT CGCCGCGGCGCTCACCTCGTGGTTGCTGGTCATCGCCGACCTCAACGATGCGTCGAAGGCGACCATCTGGCTCACGGGCA GCCTCAACGGCCGGGACTGGGCGCAGGTCTGGCCCGTGGCGGCCACGGTCGCGGTCCTGCTCCCGGTCGCGCTCGCGCTC TCCTTCGGGCTGGGCGCGATGCAGCTCGGCGACGACGCCGCGGGCGGCCTCGGGATGCGCGTCGACCGGCAGCGGACGCT CGCGCTGCTCGTCGCCGTCACGGCGGCGGCGGTCGCCACCGCGAGCGCCGGGCCGATCGACTTCGTCGCACTCGTCGTCC CGCAGGTGGCGATGCGGCTCGTCGCGTCCGCCCGGCCACCGCTGCTGACGTCGGCGGTGTTCGGTGCGCTCCTGCTGCTG GGTTCCGACGTCGTCGCCCGGACGGTGCTCCCGACCGAGCTCCCCGTCGGGACCGTCACCGCGGCGCTCGGCGCCCCCTA CCTGATGTGGCTGCTCACCTACGGGCACCGGCGCGCCCGGGTGTGA Protein sequence : MKLLEADDVLIPGRTPVRYRRFSGVWRPRIVLVTLLGLAATLLMLAVNVGLGEYRIGVLDVLRVLLGGGDPGQQFVVLDL RLPRSLTAVFVGAALGLSGAITQTVTRNALASPDILGITTGASTTAVAVIVLGGSFPLATWLWGTGSLPFAALVGGLLTA LVIYALAWRKGVEGNRLILVGVGVGAVAAALTSWLLVIADLNDASKATIWLTGSLNGRDWAQVWPVAATVAVLLPVALAL SFGLGAMQLGDDAAGGLGMRVDRQRTLALLVAVTAAAVATASAGPIDFVALVVPQVAMRLVASARPPLLTSAVFGALLLL GSDVVARTVLPTELPVGTVTAALGAPYLMWLLTYGHRRARV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusC | YP_005143744.1 | iron ABC transporter permease | Virulence | Not named | Protein | 6e-31 | 48 |
| fagB | YP_005680308.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 4e-27 | 45 |
| fagB | YP_005682398.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 8e-27 | 45 |
| fagB | YP_003782431.1 | integral membrane protein | Not tested | PiCp 1 | Protein | 8e-27 | 45 |
| fagB | YP_005684489.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 8e-27 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_0246 | YP_004330374.1 | ABC transporter permease | VFG0928 | Protein | 9e-23 | 45 |
