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Name : Psed_2213 (Psed_2213) Accession : YP_004332282.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2363151 - 2365775 bp Length : 2625 bp Strand : + Note : TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sma:SAV_7241 ATP-dependent Clp protease; SMART: ATPase, AAA+ type, core DNA sequence : ATGGACCTGAACCGCCTGACCCAGAAGTCCCAGCAGGCACTGTCCGACGCACAGGACCTGGCCACCCGTGCGGGCCACAC CGAGGTCGACGGCGAGCACCTGCTGGCCGCACTCCTCGACCAGCCGGAGGGGTTGGTGCCCCGGCTGCTCGGGGAGATGG GCATCGATGTCCGGGCGCTGCGCTCCGACCTGGAGGAAGAGCTCGGCCGCAAGCCCCGCACGACCCGGCCGGGGCCCCAA CCGGGCCAGGTCGCGGTCACGCAGCGGCTGGCCAACGTGCTCGACGTCGCCGACCGAGAGGCACGGCGGATGAAGGACGA GTACGTGTCGGTCGAACACCTGCTCGTGGCTCTGGCGGACGAGGGGTCCGCCGGCGGTGCGGGTCGGGTGCTCGCCCGGC ACACCGTCACCCGCGAGGCCATCCTCGCCGCCCTGACGCGGGTACGCGGCAACCAGCGCGTCACCTCCGCCACTCCGGAA GGGGCGTACGAGGCCCTGACGAAGTACGGGATGGACCTGGTGGAGTCGGCCCGCTCCGGTCGGCTGGACCCGGTGATCGG CCGCGACGCCGAGATCCGCCGGGTCGTCCAGATCCTGTCCCGGAAGTCGAAGAACAACCCCGTGCTGCTCGGCGAGCCCG GAGTCGGCAAGACCGCCATCGTCGAGGGTCTGGCCCAGCGCATCGTCGACGGGGACGTTCCCGAAGGCCTGCGCGAACGC ACCATCTTCGCCCTGGACATGGGGCTGCTGGTGGCCGGGGCGAAGTACCGCGGCGAGTTCGAGGAGCGGCTGCAGGCGGT GCTGTCGGAGGTCAAGGCGGCGGAGGGCCGGATCCTGCTGTTCGTCGACGAGCTGCACAACGTCGTCGGTGCAGGGGCGT CCGAGGGATCGATGGATGCCGGCAACATGCTCAAGCCGATGCTCGCCCGGGGTGAGCTGCACATGATCGGTGCGACCACG CTCACCGAGTACCGCCAGCACGTCGAGAAGGACGCCGCGCTCGAGCGCAGGTTCCAGCCCGTCTTCGTCGACGAGCCCAC CGTCGAGGACACGGTGTCCATCCTGCGCGGGTTGCGCGAGCGGTTCGAGGTGTTCCACGGTGTCCGGATCCTCGACGGGT CGTTGATCGCGGCGGCGACGTTGAGCCACCGCTACCTCACCGACCGTTTTCTGCCCGACAAGGCCATCGACCTGGTCGAC GAGGCGTGCGCCCGGCTGCGCACCGAGATCGACTCCATGCCCGCCGAGCTCGACGAGATCACCCGCAAGGTGATGCGGCT GGAGATCGAGGAGGCGGCGCTCGCCCAGGAGGAGGACGCCGCATCCCGCGCGCGGCTCGACCAGCTCCGCCGTGAGCTGG CCGACCTTCGCGGCGAGGCCGACGCCATGCGCGCCCAGTGGAATGCCGAACGGCAGGCGATCAAGCGTGTTCAGGAGCTC CGGGCGCAGCTGGAACAGGTCCGCCACGACATCCAGGATGCCGAGCGCGCCTACGACCTCAACCGCGCCGCGGAGCTGCG CTTCACGAGGCAGGCCGACCTGGAGCGCAAGCTCGAGGCCGAAGAGCGTCGGCTCGCCGAGAAGCAGGGCGAGCACCGGC TGCTGCGCGAGGTGGTGACGGCGGAGGAGATCGCAGAGATCGTCTCGGTGTGGACCGGCATCCCGGTCGCCCGGCTGACC GAGGGCGAGCGGGAGAAGCTGCTGCGCCTGGACGAGGTGCTGCACCGGCGGGTGGTGGGCCAGGACGAGGCCGTGCAGGC GGTCGCGGACGCGATCATCCGGGCCAGGTCCGGGGTGAAGGACCCGCGACGGCCGACCGGCTCGTTCATCTTCCTCGGCC CGACCGGTGTCGGGAAGACGGAGCTGGCCAAGGCGCTGGCCGAGGCGCTGTTCGACTCCGAGGACAACATCGTCCGGATC GACATGAGCGAGTACCAGGAGCGGCACACCGTGTCCCGGCTGGTCGGCGCCCCGCCCGGCTACGTCGGCTACGAGGAGGG CGGCCAGCTCACCGAGGCGGTCCGCCGCCGTCCGTACGCCGTCGTCCTCTTCGACGAGATCGAGAAGGCGCACCCGGACG TCTTCAACACGCTGCTGCAGGTCCTCGACGACGGCCGGCTCACCGACGCGCAGGGGCGCACCGTCGACTTCCGCAACACC GTCATCATCATGACGTCGAACATCGGGTCGCAGTACCTGCTCGACGGGGTCACCGACGACGGCCGGCTCGAGCCGGAGGC ACGTGATCTCGTGATGGCCGAGCTGCGGGCCCACTTCCGGCCCGAGTTCCTCAACCGGGTCGACGACACCGTGCTGTTCA CGCCGCTGAGCCAGGGCGAGATCGAGAACATCGTCGAGCTCATGCTGTCCGACCTGCGCGTGCGGCTCGCCGAGCGCAAC ATCACCGTGGAGATCGGCGACGGCGCCCGCCGCTTCATCGCGCACGAGGGCTACGACCCGGTGTACGGGGCCCGTCCGCT GCGCCGGTTCATCGCCCGGGAGGTCGAGACCCAGGTTGCCCGCGCGCTGCTGCGCGACGGAACCATCGAGGGGTCCACCA TCCGGGTCGACGTGGGCGACGACCGGCTCGTCGTCACCCACCAGCCCGTCGGGGCGCAGGCGTGA Protein sequence : MDLNRLTQKSQQALSDAQDLATRAGHTEVDGEHLLAALLDQPEGLVPRLLGEMGIDVRALRSDLEEELGRKPRTTRPGPQ PGQVAVTQRLANVLDVADREARRMKDEYVSVEHLLVALADEGSAGGAGRVLARHTVTREAILAALTRVRGNQRVTSATPE GAYEALTKYGMDLVESARSGRLDPVIGRDAEIRRVVQILSRKSKNNPVLLGEPGVGKTAIVEGLAQRIVDGDVPEGLRER TIFALDMGLLVAGAKYRGEFEERLQAVLSEVKAAEGRILLFVDELHNVVGAGASEGSMDAGNMLKPMLARGELHMIGATT LTEYRQHVEKDAALERRFQPVFVDEPTVEDTVSILRGLRERFEVFHGVRILDGSLIAAATLSHRYLTDRFLPDKAIDLVD EACARLRTEIDSMPAELDEITRKVMRLEIEEAALAQEEDAASRARLDQLRRELADLRGEADAMRAQWNAERQAIKRVQEL RAQLEQVRHDIQDAERAYDLNRAAELRFTRQADLERKLEAEERRLAEKQGEHRLLREVVTAEEIAEIVSVWTGIPVARLT EGEREKLLRLDEVLHRRVVGQDEAVQAVADAIIRARSGVKDPRRPTGSFIFLGPTGVGKTELAKALAEALFDSEDNIVRI DMSEYQERHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRNT VIIMTSNIGSQYLLDGVTDDGRLEPEARDLVMAELRAHFRPEFLNRVDDTVLFTPLSQGEIENIVELMLSDLRVRLAERN ITVEIGDGARRFIAHEGYDPVYGARPLRRFIAREVETQVARALLRDGTIEGSTIRVDVGDDRLVVTHQPVGAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_2213 | YP_004332282.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 1e-112 | 42 |
