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Name : Psed_2189 (Psed_2189) Accession : YP_004332258.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2334600 - 2336294 bp Length : 1695 bp Strand : + Note : KEGG: kra:Krad_0942 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGACCGCCGCACCGCGGATGATCACTCTTGACGCGGAGCTGCTCGGACCGGAGCCCGCCGACGACCGGGTCCTACGGGT GGACGACCTGACGGTCGGCCTCCGTCCGGTTCCGGGCGACAGCGCGGAACCGATCGTCGACGGGGTGTCGCTGAGGGTGG CCGCGGGCCGCGCGGTGGGGCTGGTCGGTGAGTCGGGTTCCGGCAAGACGCTGACCGCGCTCGCGGTGGCCGGGCTGCTC CCGTCCGCGATCCAGGTGGTCGGCGGTCGCATCGAGCTCGCCGATCGCGAGCTGACGGGTCTGGGGGAGCAGGAGGCCAG GGCTCACCTGGCCGCCTCCGTGGGGGTGGTCTTTCAGAACCCGACGGCGTCGCTCAACCCGCGGATGCGCATCGCCGCGC AGCTACGGGAGGCGCTTCCCGCCGGGACGAGCCGCCGCCGGGCCAGGGAACGGTCGGGTGAGCTGCTGACCGCGGTGGGC ATCGCGGACGTCCACAAGACCCTCGGCGCGTTCCCGCACGAGCTGTCCGGCGGGCTCAACCAGCGCGTCGTGATCGCCAT GGCGCTGGCGCGCGACCCGAAGCTGCTCATCGCCGACGAACCCACGACGGCCCTCGACGTGTCCGTGCAGGCCCAGGTCC TGGACCTCATCGACGAGCTGCGCGAACGGCTCGGTCTCGGTGTGCTGCTGGTGAGCCACGACATCGGCGTCGTCTCAGAC CGCACCGACCACGTCTACGTGATGTCGGACGGCCGGATCGTCGAGTCCGGGCCGACCACGCAGGTGCTGGGCGACCCGCA CCACGCCTACACCCGGCAGCTGCTCGCCGCGACGCCGAGCAGGCTCGAACCCGTCCGGGTCGCAGAACGCCTGCTCCCCG TCGCGGAGCCGGCGTCGCCCGTGGCCGACCAGTTGGAGGTCCGCGACGTCCGGCGCGCGTTCACGGTGCGCGGCAGCGCT GGCCGGGCCCGTCACGTCGCCCTCGACGGGGTCGACCTGACCGTCACGAAGGGTCAGGCGATCGGGCTGGTCGGAGAGTC CGGGTCGGGCAAGACCACGCTCGCGCGGATCATCGTGGGTCTGGAACGGGTCGACTCCGGCGTCGTGTTCTACGAGGGCA ACCCGGTCGCGCGGCACACCCGCGCGCAGCGCAGGCAGTGGCGCCGCGAGGTGCAGTACGTCTTCCAGGACCCGTACAGC TCGCTCGACCCCAGGCTGACCGTCGCCCAGACCTTGCGGGAGCCGCTGGAGATCAACTTCCCGGGGCTGTCCCGCGGGGA GGTCGCGGCCCGGATCGACTCCCTGCTCGACGAGGTGGAGCTGCCCCGGAGCTTCCGCGACCGGCATCCCTCCGAGCTGT CGGGCGGGCAACGGCAGCGGGTCGGCATCGCACGCGCACTGGCGACCGAACCGTCGGTGATCATCGCCGACGAGCCGGTC TCCGCACTCGACCTGTCCGTGCAGGCCCGCATCCTCCGGCTCCTCGCGCGGCTGCGGATCGAACGCGACCTCACCTACCT GTTCATCTCCCATGACCTCGCCGTAGTCCGCTACCTGTGCGAGGACCTCGTCGTGCTGCGCGAGGGATCCGTCGTCGAAC GGGGCCGCACCGACGACGTTCTGGAACGACCCGAGAGCCCCTACACGCGGGCGCTCGTCGACGCGATCCCCGGCCGCGGC TTCGCACGATCGTGA Protein sequence : MTAAPRMITLDAELLGPEPADDRVLRVDDLTVGLRPVPGDSAEPIVDGVSLRVAAGRAVGLVGESGSGKTLTALAVAGLL PSAIQVVGGRIELADRELTGLGEQEARAHLAASVGVVFQNPTASLNPRMRIAAQLREALPAGTSRRRARERSGELLTAVG IADVHKTLGAFPHELSGGLNQRVVIAMALARDPKLLIADEPTTALDVSVQAQVLDLIDELRERLGLGVLLVSHDIGVVSD RTDHVYVMSDGRIVESGPTTQVLGDPHHAYTRQLLAATPSRLEPVRVAERLLPVAEPASPVADQLEVRDVRRAFTVRGSA GRARHVALDGVDLTVTKGQAIGLVGESGSGKTTLARIIVGLERVDSGVVFYEGNPVARHTRAQRRQWRREVQYVFQDPYS SLDPRLTVAQTLREPLEINFPGLSRGEVAARIDSLLDEVELPRSFRDRHPSELSGGQRQRVGIARALATEPSVIIADEPV SALDLSVQARILRLLARLRIERDLTYLFISHDLAVVRYLCEDLVVLREGSVVERGRTDDVLERPESPYTRALVDAIPGRG FARS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-86 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-72 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-72 | 42 |
