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Name : Psed_2033 (Psed_2033) Accession : YP_004332113.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0614 EC number : - Position : 2166385 - 2167413 bp Length : 1029 bp Strand : - Note : PFAM: Periplasmic binding protein; KEGG: rer:RER_04570 iron-siderophore binding protein DNA sequence : GTGACCGATACGACGACGTCCCGTCCGCGTCGACGGCTGCGCCGGGCCGGCGCAGCCGCGGCCGCCCTGCTCGCCCTCGC CGTCGCCGCCTGCTCCGGCCCCTCCCAGGACACTCGCCCCGGCAACACCGACGTCGCGACGGGCGGGACGCTCTTCGCCA CGGCCGACGAGGCGACGGCCGCGTTCAGCGCCGACGTCGCGCCGGGCGTCTTCCCGCGGACGATCACCCACGCGGCCGGC ACCACGAGGCTGGAGAAGAAGCCGCAGCGCATCGCCGTGCTCGACAGCGGCGAGCTCGACGACGTCATCGCCCTCGGCCT CACGCCCGTCGTCATGGCGAACCCGAACAACACCCCGCCCAGCTACCTCGCGGAGAAGACGGCAGGCACCGCGACGGCGG GCGACACGAACAACCTCAACCTCGAGGCGATCGCCGCCGCCAGGCCGGACCTGATCCTCGGCAGCAAGCTGCGCGCCGAC CAGCTCTACGACCGGCTCTCGGCCATCGCGCCGACGGTGTTCAGCATCCGCCCCGGTTTCCCGTGGAAGGAGAACTTCCT GCTCGTCGGGGCCGCCACGGGCGAGGAGGACGCCGCGGTGCGCATCCTCAACGACTACCAGCACCGGGCCGACGAGGTGC GCTCCGAGGTCGCGGCCGCGCCCCCGACCATCTCGATGGTGCGGTTCATGCCGGGCCGGATCAGGCTCTACGGCAACCTC TCGTTCATCGGCGTCATCCTGTCCGACGTCGGGCTGCCGCGGCCGAAGACCCAGAACTTCGACGAGCTCGCCGCCGAGAT CTCGGCCGAGCGCATCGACCAGGCCGACGGCGACCGGATCTTCTACTCCAGCTACGGGCCGCCCGAGCAGACAGCGCAGC CGGCGGTCCTGGACAGCGCGCTGTGGAAGGGGCTGTCCGCGGTGCGGGCCGACCACGTCCGGCCCGTCGACGACGAGGTC TGGTTCCTCGGGCTGGGTCCCGTCGGCGCCGGGAAGGTGCTCGACGACCTCCAGCGGCTGCTGGGCTGA Protein sequence : MTDTTTSRPRRRLRRAGAAAAALLALAVAACSGPSQDTRPGNTDVATGGTLFATADEATAAFSADVAPGVFPRTITHAAG TTRLEKKPQRIAVLDSGELDDVIALGLTPVVMANPNNTPPSYLAEKTAGTATAGDTNNLNLEAIAAARPDLILGSKLRAD QLYDRLSAIAPTVFSIRPGFPWKENFLLVGAATGEEDAAVRILNDYQHRADEVRSEVAAAPPTISMVRFMPGRIRLYGNL SFIGVILSDVGLPRPKTQNFDELAAEISAERIDQADGDRIFYSSYGPPEQTAQPAVLDSALWKGLSAVRADHVRPVDDEV WFLGLGPVGAGKVLDDLQRLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagD | YP_003782433.1 | iron-siderophore binding protein | Virulence | PiCp 1 | Protein | 4e-79 | 54 |
| fagD | YP_005680310.1 | Iron siderophore binding protein | Not tested | PiCp 1 | Protein | 4e-79 | 54 |
| fagD | YP_005682400.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 4e-79 | 54 |
| fagD | YP_005684491.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 4e-79 | 54 |
