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Name : Psed_0018 (Psed_0018) Accession : YP_004330155.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : transposase mutator type Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 20268 - 21545 bp Length : 1278 bp Strand : + Note : PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein DNA sequence : ATGACCGACACGATCGAGCCCATGCCGCGGGCTCGGATTGATCACCAGCAGTTCGCTCAGCAGTTGGTGGAGGCCGCCAA GGCCGACGGGGTGGAGCTCGTCGGCCCGGACGGGCTGCTCACCGGGCTGACCAAAACAGTGCTCGAGACCGCCCTGGAAG CCGAGCTCAGCGAGCACCTGGGCTATGACCGCCACGACCCGGCCGGGCGCGACGGCGGGAACTCCCGCAACGGCACCCGC ACCAAGACCGTGCTCACCGAGATCGGCCCGGTCGAGATCGAGGTGCCGCGCGACCGCGACGCCAGCTTCGAGCCTCAGAT CGTGCGCAAGCGCCAACGCCGCCTGGACGGGATCGACGAGATCGTGCTGTCGCTGACCGCCCGCGGCCTGACCACCGGGG AGGTGGCCGCGCACTTCGCCGAGGTCTACGGGGCCAAGGTCTCCAAGGACACCATCTCGAGGATCACCGACAAGGTCCTC GACGAGCTGGGCGAGTGGCAGAACCGCCCGCTCGACGCCGTCTATCCGGTGCTGTTCATCGACGCTCTCTACGTCAAAGT CCGCGACGGGCAGGTCACCAACCGGCCCTTCTACGTGGTCATCGGGGTGACCGTGGACGGGCAGCGCGACATCCTCGGGA TCTGGGCCGGCGAGGGCGGCACCGGTGGGGAGGGCGCGAAGTTCTGGCTGCAGGTTCTGACCGAGATCAAAAACCGCGGG GTCGGCGATGTGTGCATCGCCGTCTGCGACGGCCTGAAGGGCCTGCCCGAGGCGATCACCACCGCCTGGCCGCAGGCGGT GGTGCAGACGTGTGTGTTGCACCTGATCCGCAACACCTTCCGCTACGCCTCCCGGCGCTACTGGGAGCAGCTGGCCAAGG ACCTGCGCCCGGTCTACACCGCCCCGACCGAGGCCGCGGCCCAGGCCCGGTTCGCCGAGTTCGCCGAGACCTGGGGCGGG CAGTATCCGGCGATCATCGCGCTGTGGCGGGCGGCGTGGTCGGAGTTCGTGCCGTTCCTGGACTACGACGTGGAGATCCG CAAGGTCATCTGCTCCACGAATGCGATCGAGTCGCTCAACGCCCGCTACCGGCGGGCGATCAAGGCCCGGGGGCACTTCC CGACCGAGCAGGCCGCGCTGAAGTGCCTCTACCTGGTCACCCGCTCACTCGACCCCACCGGGAAGGGCCGAACCCGCTGG GCGATGCGCTGGAAGCCGGCCCTGAACGCCTTCGCGATCACCTTCGCCGGCCGTATCGTCCCCAGCAACGGAAACTAG Protein sequence : MTDTIEPMPRARIDHQQFAQQLVEAAKADGVELVGPDGLLTGLTKTVLETALEAELSEHLGYDRHDPAGRDGGNSRNGTR TKTVLTEIGPVEIEVPRDRDASFEPQIVRKRQRRLDGIDEIVLSLTARGLTTGEVAAHFAEVYGAKVSKDTISRITDKVL DELGEWQNRPLDAVYPVLFIDALYVKVRDGQVTNRPFYVVIGVTVDGQRDILGIWAGEGGTGGEGAKFWLQVLTEIKNRG VGDVCIAVCDGLKGLPEAITTAWPQAVVQTCVLHLIRNTFRYASRRYWEQLAKDLRPVYTAPTEAAAQARFAEFAETWGG QYPAIIALWRAAWSEFVPFLDYDVEIRKVICSTNAIESLNARYRRAIKARGHFPTEQAALKCLYLVTRSLDPTGKGRTRW AMRWKPALNAFAITFAGRIVPSNGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 2e-75 | 44 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-72 | 43 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 1e-69 | 42 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-67 | 41 |
