Gene Information

Name : Psed_1933 (Psed_1933)
Accession : YP_004332017.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 2063052 - 2063732 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: rer:RER_51400 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACCACCGGACTTCTGCTGGAACGTGTCACCCTGCGCCACGGCGACGGCGAGGACGAGACCGTCGCGCTCGACGACGT
GTCGCTGCACGTCGAGCCGGGCGAGATCGTCGCGGTCGTCGGACCGTCCGGGGCGGGCAAGTCGAGCCTGCTCGCGGTCG
CGGGCGGGCTCACGGTGCCCGACGCGGGCCGGGTCGTCGTCGACGGCGTCGACCTCGCCGGGCCGGAACGAGTGCGGGCG
CGAATCCGCCGCACCCGCATCGGCTACGTCTTCCAGAGCAACAACCTGCTGCCCGCGCTGACCGCCGTCGACCAGGTGCG
GCTGCCACTGACGTTCGGCCGGATCGAGAACCCGCGGGACCCGGTCGAGCTGCTCGCCGAGGTCGGCATGGAGCACAAGA
GCGGCCGCAGGCCGCATCAGCTCTCCGGCGGGGAACGCCAGCGCGTCGGAGTGGCCCGGGCGCTCGTCACCCGGCCCGGT
GTGCTGCTCGTGGACGAGCCGACGTCCGCACTGGACCGCCGGCGCAGCCACGAGGTACTCGCCCTGCTCGCCCAGGAGAC
CCACGAGCACCACATGGCTACTGTTGTCGTCACGCACGATCACGACGTGCTGCGGCACTGCGACCGGGTGTTCGAGATGA
TCGACGGCAGGCTGACCGAGGAGCGGCCTGCCATGGCGTGA

Protein sequence : 
MTTGLLLERVTLRHGDGEDETVALDDVSLHVEPGEIVAVVGPSGAGKSSLLAVAGGLTVPDAGRVVVDGVDLAGPERVRA
RIRRTRIGYVFQSNNLLPALTAVDQVRLPLTFGRIENPRDPVELLAEVGMEHKSGRRPHQLSGGERQRVGVARALVTRPG
VLLVDEPTSALDRRRSHEVLALLAQETHEHHMATVVVTHDHDVLRHCDRVFEMIDGRLTEERPAMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_1933 YP_004332017.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 9e-27 43