Gene Information

Name : Psed_1540 (Psed_1540)
Accession : YP_004331631.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1608233 - 1609009 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: fri:FraEuI1c_6806 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGTACGACGCGACGACGCGCGAGGTCGTAGCGCCCGTGCCCGACGAGTCCGTCGCCGCCGCGGCGACCCCCGACCCGGC
GCCGCCGGAGCTGGTGGTCCGCGGGCTGCGCAAGACCTACGAGGCCGAGACGGCCCCGGTGCGCGCGCTGCGCGGGGTGG
ACCTGACCGTCGGGCGCGGCGAGTTCGTCGCACTGATGGGCCCGTCCGGCAGCGGGAAGTCGACGTTGCTGCACCTGCTC
GCCGGCCTCGACCGCGCCGACGAGGGCTCGGTGAGCATCGCCGGCATCCGCACCGAGGAGCTGTCCGCGACGCGGCTCGC
CCGGCTGCGCCGCCGCCACGTCGGGCTGGTGTTCCAGTTCTTCCACCTGATCGACCACATGTCCGCGCTGGAGAACGTCG
CGCTGGCCGCGCTCGTCGCGGGCGCGAAACCCGCCGAGGCGACCGAACGGGCCCGCGACCTGCTCGACACGCTGGGCCTG
CTGGAGAAGGCGGGGGAGAGCCCGGCGAACCTGTCCGGCGGGCAGCGGCAGCGGGTCGCGATCGCGCGGGCCCTGGCCAA
CCGGCCGACACTGCTGCTGGCCGACGAGCCGACCGGTGCGCTGGACTCCGACGGCGCGGCCGAGGTGCACGACCTGTTCA
CCCGCATGCACCGCGTCGGCCAGACGATCCTCATGGTCACCCACAGCGCCGACGTGGCCGCGGGCGCGCAGCGCATCGTG
CGGATGCGCGACGGCGTGCTGCTCGGGGAGATCGCGACCACCGGGGAGCAGCGGTGA

Protein sequence :
MYDATTREVVAPVPDESVAAAATPDPAPPELVVRGLRKTYEAETAPVRALRGVDLTVGRGEFVALMGPSGSGKSTLLHLL
AGLDRADEGSVSIAGIRTEELSATRLARLRRRHVGLVFQFFHLIDHMSALENVALAALVAGAKPAEATERARDLLDTLGL
LEKAGESPANLSGGQRQRVAIARALANRPTLLLADEPTGALDSDGAAEVHDLFTRMHRVGQTILMVTHSADVAAGAQRIV
RMRDGVLLGEIATTGEQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_1540 YP_004331631.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 9e-28 46
Psed_1540 YP_004331631.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-31 42
Psed_1540 YP_004331631.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 7e-30 41
Psed_1540 YP_004331631.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 1e-31 41