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Name : Psed_0143 (Psed_0143) Accession : YP_004330272.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 155585 - 156886 bp Length : 1302 bp Strand : + Note : TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: sen:SACE_5565 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal DNA sequence : GTGTTCGCTCGCCGCATCGCCGTCGTCGGAGCCGGGTACGTCGGCCTCACCACCGCCGCGTGCCTGGCCTCCCTGGGACA CCACGTCGTCTGCGCCGACATCGACGCCGCCAAGGTCGACCGGCTGCGTGCGGGCGAGGTCGGCATCCTCGAGCCCGGCC TGCACGACCTCGTCGCCGAGGGGACGGCCGCGGGCCGGCTGCAGTTCTGCGTCGGCGCCGGTGCGGCCGTCGCGCGGCCC GATCTCCCGCCCGTCGAGGTGCTGTTCCTCTGCGTGCCGACGCCGATGGGTGCCGGCGGGGGTGCCGACCTCGCCGCGGT CGAGGCCGTGGCCGCCGAGGTGCGGCACCTGCTGCCGGCGGGCTGCGTCGTCGTCACGAAGTCGACCGTGCCCGTCGGGA CCGCCGAGGCGACGCGGAAGCTGTTGCGGCGCAGGGATGTCGCCGTCGTGAGCAATCCCGAGTTCCTGCGCGAGGGCAGC GCGGTGCACGACTTCCTCAACCCGGACCGGATCGTCGTCGGGTCCGACCAGCAGGACGCGGCCGAACGGGTCGCCGCGCT GTACGCCCGGCTCGGGGCCCCGACCGTGCTCACCGACGCCGCGAGCGCCGAGATGGTCAAGTACGCCGCCAACGCCTTCC TCGCGATCAAGCTCTCCTACGTCAACGCGCTCGCCGAGCTGTGCGACGTGCTCGGCGCCGACGTCGCCGACGTGACCGAG GGGATGGGTCACGACCGGCGCATCGGTTCCGCGTTCCTCTCGCCGGGGCCCGGTTGGGGCGGGTCGTGCCTGCCGAAGGA CACCCGCGCGCTGGTCCAGGTCGCCGCCGCGGTGGGGGTGGACGTGCCGCTGGTCAGCGCGGGGATCGCGGCCAACGAAC GGCAGCGCGACCTGATGGTCGCCAAGATCGGCGAGGCGGTCGGCACGCTCGACGGTGCCCGGATCGGGTTGCTCGGGTTG ACGTTCAAGGCGGGCACCGACGACCTGCGCGACTCACCGGCACTCGCGGTGGCGCGGCTGCTGTCCGACGCCGGCGCCGA GCTCACCGGCTACGACCCCGGCTGCCCCGCCGCCGTTCCGGGCAGCACCGACGACGTCCACGTCGTCGACGACCCGATGC GGGCGGCCAAGGACGCCGACGCGCTCGTCGTCCTGACCGAGTGGCCCGAGTTCCGGCAGCTCGACTGGACGGCGCTGGGT GGGGTCGTCGGCCGGCGGATCGTCGTCGACACGCGCAACCTGCTCGACCCGGACGTGGTGCGCCGCGCGGGTTTCTCCTG GATCGGCGTGGGTCGGCGCTGA Protein sequence : MFARRIAVVGAGYVGLTTAACLASLGHHVVCADIDAAKVDRLRAGEVGILEPGLHDLVAEGTAAGRLQFCVGAGAAVARP DLPPVEVLFLCVPTPMGAGGGADLAAVEAVAAEVRHLLPAGCVVVTKSTVPVGTAEATRKLLRRRDVAVVSNPEFLREGS AVHDFLNPDRIVVGSDQQDAAERVAALYARLGAPTVLTDAASAEMVKYAANAFLAIKLSYVNALAELCDVLGADVADVTE GMGHDRRIGSAFLSPGPGWGGSCLPKDTRALVQVAAAVGVDVPLVSAGIAANERQRDLMVAKIGEAVGTLDGARIGLLGL TFKAGTDDLRDSPALAVARLLSDAGAELTGYDPGCPAAVPGSTDDVHVVDDPMRAAKDADALVVLTEWPEFRQLDWTALG GVVGRRIVVDTRNLLDPDVVRRAGFSWIGVGRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-51 | 43 |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-51 | 43 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-51 | 43 |
