Gene Information

Name : Psed_1314 (Psed_1314)
Accession : YP_004331410.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Resistance
Product : Alkylmercury lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.99.1.2
Position : 1375976 - 1376629 bp
Length : 654 bp
Strand : -
Note : KEGG: sep:SE0086 alkylmercury lyase; PFAM: Alkylmercury lyase

DNA sequence : 
GTGAGCACTGCACCCGAGCAACTGGTCGCCCAGCTCGCCGATGCTCTGTACGGCACCGGCCACCCCGCCACGCAGCCGTG
GTTGTTCCGCCCGCTGCTGCGGCTACTGGCCGAGGGGGAGCCCGTCACCCTCGACCGGTTGGCGGAGGCCGCCGGCACCA
GCGTCGACCAGGTGCGCCAGGCGCTGGCCGCCGAGCCGGACACCGAATACGACGCCGACGGCCGGGTCGTCGGGCTGGGC
CTGACCCAGAACCCGACCCCGCATCGCGTCGAGATCGACGGGCGGACGCTGTATGGCTGGTGCGCGATGGACACCTTGAT
GTTCCCGCTCATCCTGCAGCGCCCGGTCCACGTGCTCTCGACCTGCCCGGCCACCGGGACCGAGATCCGCTTGACCGCCG
AGCCCGAGCGGGTCACCGACGTCGAACCGGCTACCGCGGTCGTATCCCAGGTTCCGGCGCCAGAAGACGGCTGCGGCGTG
CGCGCGCCGGTGTGCGACCAGGGCCACTTCTTCGGCTCCGCGCAGGCCGCTGCCGACTGGCAACGCCAGCATCCCGAGTC
GGTGGTCCTGCCGGTGGCCGACGGGCATGTCTTCGGCCGCCGCCTCCTTGAAGCCCTCTTCTCCGCCGACGCACTCCCGA
CGCCCCAGGAGTGA

Protein sequence : 
MSTAPEQLVAQLADALYGTGHPATQPWLFRPLLRLLAEGEPVTLDRLAEAAGTSVDQVRQALAAEPDTEYDADGRVVGLG
LTQNPTPHRVEIDGRTLYGWCAMDTLMFPLILQRPVHVLSTCPATGTEIRLTAEPERVTDVEPATAVVSQVPAPEDGCGV
RAPVCDQGHFFGSAQAAADWQRQHPESVVLPVADGHVFGRRLLEALFSADALPTPQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0086 NP_763641.1 alkylmercury lyase Not tested SCCpbp4 Protein 2e-50 52
merB BAB47641.1 organomercurial lyase Not tested Type-III SCCmec Protein 3e-50 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_1314 YP_004331410.1 Alkylmercury lyase BAC0658 Protein 1e-50 52
Psed_1314 YP_004331410.1 Alkylmercury lyase BAC0663 Protein 2e-45 45
Psed_1314 YP_004331410.1 Alkylmercury lyase BAC0654 Protein 2e-46 44
Psed_1314 YP_004331410.1 Alkylmercury lyase BAC0657 Protein 1e-32 43