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Name : rplS (HMPREF9137_0040) Accession : YP_004327792.1 Strain : Prevotella denticola F0289 Genome accession: NC_015311 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 49792 - 50157 bp Length : 366 bp Strand : + Note : identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024 DNA sequence : ATGGATTTAATTAAAGTTGCTGAGGAAGCATTTGCAACCGGCAATCAGTTTCCAGAGTTCAAAGCTGGTGACACTGTCAC TGTCGCTTACAAAATCATCGAGGGTAACAAGCAGCGTATTCAGCTCTACCGTGGCGTAGTCATCAAGATTTCGGGCCATG GCGAGAAGAAGCGTTTCACGGTCCGTAAGATGTCCGGTACCATCGGTGTCGAGCGTATCTTCCCATTGGAGTCACCGAAT ATCGATTCTATCGAGGTGAACAAGCATGGTAAGGTTCGTCGTGCGAAACTCTACTACCTGCGCAAGCTCACAGGTAAGGC CGCACGCATCAAGGAGAAAAGAACCGTTGCTGCTGCTGAGAAGTAA Protein sequence : MDLIKVAEEAFATGNQFPEFKAGDTVTVAYKIIEGNKQRIQLYRGVVIKISGHGEKKRFTVRKMSGTIGVERIFPLESPN IDSIEVNKHGKVRRAKLYYLRKLTGKAARIKEKRTVAAAEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 8e-26 | 59 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-21 | 57 |
