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Name : kdsB (HMPREF9137_2340) Accession : YP_004329984.1 Strain : Prevotella denticola F0289 Genome accession: NC_015311 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 2739883 - 2740800 bp Length : 918 bp Strand : - Note : identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : TTGTGTTGCAAGATTGCCTGCACCTATCAACGACACCTTCATCATACCGACAAATTTAATACTTTTAAAGGAAATAAGTC TGAAATACACTTCCATTTTAAAAAAGATTTGCTATTTTTGTGCGTACTTCTGCCAAGGAAGTGTGACATATCAAACTTTA AAAGGATAAAGGAATCTATGGAATTTATCGGAATTATCCCGGCTCGCTACGGCTCTTCACGTTTTCCTGGAAAGCCTCTT GCAATGCTTGGAGGAAAGACCGTCATCGAGCACGTTTACAGGCAAGTAAGCAGCGTGTTGACAGATGTCTATGTGGCCAC AGACGATCCCCGTATTCATAACGCTGTTGCAGCGTTCGGCGGAAAGTCCGTAATGACCCGTCCCGACCATAAAAGCGGCA CGGACAGAATCTGCGAAGCACTCGATAAAATCGGTGGCAGCTTCGATGTCGTCATCAACATCCAGGGCGATGAACCTTTC ATACAGAAAAGCCAGATTGAGACAGTCATGCAGTGTTTTGATGATTCACGCACACAGATTGCCACGCTGGGCAAGCCTTT TGAGACCATTGAGGCTGCACAGAATCCCAATTCGCCCAAGATAGTCCTCGACAACAATGGCTATGCCCTTTATTTCTCAC GCTCCGTCATACCCTTTGTTCGGGGCAAGGCGACTTCGGAATGGCTTTCCACCTATCCTTTCCTCAAGCACATCGGGCTA TATGCCTACCGCACAGAAGTGCTGCGTGAGGTGAGCCGTCTTCCGCAATCCTCGCTCGAACTGGCCGAAAGTCTCGAACA GCTGCGATGGCTGCAGAACGGTTATAAAATCAAGGTAGGTCTGACAGATGTAGAGACAATCGGCATTGATACGCCGGAAG ACCTGCAACGGGCAGAGCGGCAATTGTCTGCCCTGTAA Protein sequence : MCCKIACTYQRHLHHTDKFNTFKGNKSEIHFHFKKDLLFLCVLLPRKCDISNFKRIKESMEFIGIIPARYGSSRFPGKPL AMLGGKTVIEHVYRQVSSVLTDVYVATDDPRIHNAVAAFGGKSVMTRPDHKSGTDRICEALDKIGGSFDVVINIQGDEPF IQKSQIETVMQCFDDSRTQIATLGKPFETIEAAQNPNSPKIVLDNNGYALYFSRSVIPFVRGKATSEWLSTYPFLKHIGL YAYRTEVLREVSRLPQSSLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRAERQLSAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-39 | 48 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-39 | 47 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 9e-39 | 47 |
