Gene Information

Name : rpmE (HMPREF9137_1834)
Accession : YP_004329504.1
Strain : Prevotella denticola F0289
Genome accession: NC_015311
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0254
EC number : -
Position : 2128333 - 2128584 bp
Length : 252 bp
Strand : +
Note : identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105

DNA sequence :
ATGAAACAAGGTATTCATCCCGAAGACTATCGCCCCGTCGTATTCAAGGATATGTCCAACGGCGATATGTTCCTTACAAA
GTCTACATGCAAGACTTCAGAGACAGTAGAGTTTGAAGGCGAAACTTACCCATTGGTAAAAGTCGAAATCTCAAGCACCT
CTCACCCGTTCTACACAGGCAAGAGCAAGCTTGTCGATACAGCAGGTCGCGTCGACCGCTTCATGAGCCGCTACGGTAAG
CTGAAGAAGTAA

Protein sequence :
MKQGIHPEDYRPVVFKDMSNGDMFLTKSTCKTSETVEFEGETYPLVKVEISSTSHPFYTGKSKLVDTAGRVDRFMSRYGK
LKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 5e-15 51
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 5e-15 51