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Name : nifJ (HMPREF9137_1524) Accession : YP_004329208.1 Strain : Prevotella denticola F0289 Genome accession: NC_015311 Putative virulence/resistance : Virulence Product : pyruvate synthase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1770070 - 1773645 bp Length : 3576 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02175; match to protein family HMM TIGR02176 DNA sequence : ATGGCTAAAGAAAAGAAGTTTATCACTTGTGATGGTAACGAGGCCGCTGCTCATGTGAGCTATATGTTCTCTGAGGTTGC AGCAATCTATCCTATCACTCCTTCATCTCCAATGGCTGAGCACGTCGACGAGTGGTCGGCACGCGGACGGAAGAACCTCT GGGGTCAGACCGTAAGCGTACAGGAGATGCAGTCAGAGGGGGGCGCAGCAGGTGCCGTACACGGTTCACTGCAGTCGGGT GCTCTCACGACAACCTTCACCGCATCACAGGGACTGCTCCTGATGATTCCTAACATGTACAAGATTGCCGGTGAACTTTT GCCATGCGTGTTCAACGTTTCAGCACGCACACTCGCAAGTCACGCTCTTTGTATCTTCGGTGACCATCAGGACGTAATGG CTTGCCGTCAGACAGGTTTTGCCATGTTCTGCTCGGGTTCTGTCCAGGAGGTCATGGACCTTTCTGCTGTTCCTCATCTT GCTTCACTGAAGACTTCCGTTCCTTTCATCAACTTCTTCGATGGTTTCCGTACCTCCCATGAGTATCATAAGATCGAGTG CCTCGACCAGGAGGACATCCGTCCGCTGGTTGACGAAGAGGACATCAAACGGTTCCGCGACCGTGCCATGTCACCGGAGC ATCCTGTCGTACGCGGTACTGCCGAGAACCCGGAGACCTTCTTCACACACCGTGAAGCAAGCAACTCTGCCTACGAGAAT GTACCGGAAGTTGTTGAACACTACCTCAATGAGCTGACCAAGATTACCGGCCGTGAGCATCACCTCTTCGATTACTATGG TGCAAAGGATGCGGAGAACATCATCATCCTGATGGGTTCTGCCACAGAAGCCGCTCGCGAGGCTATCGACTACCTGATGT CTCAGGGCAAGAAGGTGGGTATGGTCGCCGTTCATCTCTACCGTCCATTCTCTGTCAAGCACCTGTTGGCAGCAGTTCCA AAGACTGTTAAGCGTATCGCAGTGCTCGACCGTACCAAGGAGCCGGGTGCAGAGGGTGAGCCGTTGTACCTCGATGTCAA GAGCGCATTCTACGATGTCGAGAACAAGCCGCTGATAGTCGGTGGCCGTTACGGCCTCGGTTCTGCCGATACCACACCCG CCAAGATCATCGCTGTTTACAACAATCTCGAACTGCCGGAGCCAAAGGATCATTTCACTGTAGGTATCGTGGATGATGTC ACCTTTACTTCTCTTCCGGAGGTTGAGGAGATTCCATTGGGCGGCAAAGGAATGTTCGAGGCTAAGTTCTATGGCCTGGG AGCTGACGGCACTGTCGGTGCTAACAAGAACTCTGTTAAGATTATCGGCGACAACACCGACAAGCACTGTCAGGCTTACT TCTCTTACGACTCCAAGAAGTCGGGCGGCTTCACCTGCTCTCACCTCCGCTTCGGCGACAGCCCGATCCGTTCTACCTAT CAGGTGAACACTCCGAACTTTGTTGCCTGCCACGTTCAGGCCTACCTGAACATGTACGATGTCACACGTGGCCTGCGCAA GAACGGTACATTCCTGCTGAATACTATCTTTGACGGAGAAGAGCTTGTAAACTTCATTCCCAACAAGGTGAAACGTTACT TCGCCAAGAACAACATCACCGTTTACTACATCAATGCGACCAAGATCGCACAGGAGATCGGGCTTGGCAACCGTACCAAT ACCATCCTCCAGTCGGCTTTCTTCCGTATCACGGAGGTTATTCCACTCGACCTTGCGGTAGAGCAGATGAAAAAGTTCAT CGTCAAGAGCTACAGCAAGAAGGGGCAGGATGTCGTAGACAAGAACTTTGCTGCCGTTGACCGTGGTAACGAGTACAAGC AGCTGGCTGTTGACCTTGCATGGGCAAACCTCCCTGACGATGAGGCCAAAGCCGACGATGCACCCGCATTCGTCAAGGAA CTCGTACGCCCGATGAACGCACAGGCAGGCGACCTCCTGAAAGTGTCAGACTTCGTAAAGCACAACACGGTTGACGGTAC ATGGTCGGTAGGTACCGCTGCTTACGACAAGCGCGGTGTCGCTGCTTTCGTTCCTACATGGGACGCAGAGAACTGTATCC AGTGCAACAAGTGTTCATTCGTCTGTCCTCACGCCTGTATCCGTCCGTTCGTCCTCGACGAACAGGAGAAGGCCGGCTTC AACGACACCACTCTCGACATCCTCGCACCCAAGCAGCTCAAGGGCATGCAGTTCCGCATCGGCGTATCAGTTCTCGACTG TACAGGTTGCGGCAACTGTGCTGACGTCTGTCCGGGCAAGAAGGGCAACAAGGCTCTCAAGATGACACAGTTCGTTGCCG GTGAAGAAGAGGCCACGACACGTGCCGCCAAGTGGGAGTACCTCGTCAAGAACGTCAAGAGCAAGCAGAACCTGGTTGAC ATCAAGTCGAATGCCAAGAACTCCCAGTTTGCTCAGCCGCTGTTCGAGTTCTCAGGAGCTTGTGCGGGCTGTGGTGAGAC ACCGTATGTGAAGCTCGTTTCACAGCTTTTCGGCGACCGTGAGATGATTGCCAACGCTACCGGCTGCTCTTCCATCTACT CTGCTTCCGTTCCTTCTACCCCGTATACAACCAACGAGAACGGACAGGGACCAGCCTTCAACAACTCACTGTTCGAGGAC TTCTGCGAGTTCGGCATGGGTATGGCTTTGGGCAACAAGAAGATGCGTGAGCGCATCGTCGTGCTGCTCAATGAGCTGAT GGCCGACGACAAGACACCAGCCGACTTCAAGGAGGCTGCACAGGAGTGGCTCGACAACATGCATGATGCGGATGCGTCAA AGGTTGCCGCTGCCAAGCTGAAACCGCTGATTGAAGCTGGCGCAGAGCATGGATGCCCTGTATGTGCCGAGCTGAAGACC CTCGACCACTATCTCGTCAAGCGCAGCCAGTGGATTATCGGTGGTGACGGTGCTTCCTACGATATCGGTTACGGCGGTCT CGACCACGTCATCGCTTCCGGAGAGGATGTCAACATCCTGGTACTCGATACAGAGGTTTACTCCAACACGGGTGGCCAGA GTTCAAAGTCTACTCCGCTCGGCGCCATTGCTCAGTTCGCTGCCAAGGGCAAGCGTGTACGCAAGAAAGATCTCGGTCTG ATGGCTACAACCTACGGTTACGTTTACGTAGCACAGGTTGCCATGGGTGCTGACAACGCACAGACATTGAAGGCCATCCG TGAGGCTGAGGCTTATCCCGGGCCGTCGCTCATCATCGCTTACTCTCCGTGTATCAACCACGGTCTGAAGATCAAGGGCG GTATGGGTCGCAGTCAGGCGCAGGAGGCCAATGCTGTTGCCTGCGGTTACTGGCACCTCTGGCGTTACAACCCACAGTTG GCAGAAGAGGGCAAGAACCCGTTCTCTCTCGATTCCAAGGTACCGGACTGGAGCAAGTTCCAGGACTTCCTCCGCAGCGA GGTACGCTTCCTTTCTGTCCTCAAGGCTTATCCCAATGAGGGAGAAGAGCTCTTCAAGGCCTGTGAGGACATGGCGAAAC TCCGTTACCAGAGTTATGTCCGCAAGACGAAGGAAGACTGGAGTGAGGAGGCTTAA Protein sequence : MAKEKKFITCDGNEAAAHVSYMFSEVAAIYPITPSSPMAEHVDEWSARGRKNLWGQTVSVQEMQSEGGAAGAVHGSLQSG ALTTTFTASQGLLLMIPNMYKIAGELLPCVFNVSARTLASHALCIFGDHQDVMACRQTGFAMFCSGSVQEVMDLSAVPHL ASLKTSVPFINFFDGFRTSHEYHKIECLDQEDIRPLVDEEDIKRFRDRAMSPEHPVVRGTAENPETFFTHREASNSAYEN VPEVVEHYLNELTKITGREHHLFDYYGAKDAENIIILMGSATEAAREAIDYLMSQGKKVGMVAVHLYRPFSVKHLLAAVP KTVKRIAVLDRTKEPGAEGEPLYLDVKSAFYDVENKPLIVGGRYGLGSADTTPAKIIAVYNNLELPEPKDHFTVGIVDDV TFTSLPEVEEIPLGGKGMFEAKFYGLGADGTVGANKNSVKIIGDNTDKHCQAYFSYDSKKSGGFTCSHLRFGDSPIRSTY QVNTPNFVACHVQAYLNMYDVTRGLRKNGTFLLNTIFDGEELVNFIPNKVKRYFAKNNITVYYINATKIAQEIGLGNRTN TILQSAFFRITEVIPLDLAVEQMKKFIVKSYSKKGQDVVDKNFAAVDRGNEYKQLAVDLAWANLPDDEAKADDAPAFVKE LVRPMNAQAGDLLKVSDFVKHNTVDGTWSVGTAAYDKRGVAAFVPTWDAENCIQCNKCSFVCPHACIRPFVLDEQEKAGF NDTTLDILAPKQLKGMQFRIGVSVLDCTGCGNCADVCPGKKGNKALKMTQFVAGEEEATTRAAKWEYLVKNVKSKQNLVD IKSNAKNSQFAQPLFEFSGACAGCGETPYVKLVSQLFGDREMIANATGCSSIYSASVPSTPYTTNENGQGPAFNNSLFED FCEFGMGMALGNKKMRERIVVLLNELMADDKTPADFKEAAQEWLDNMHDADASKVAAAKLKPLIEAGAEHGCPVCAELKT LDHYLVKRSQWIIGGDGASYDIGYGGLDHVIASGEDVNILVLDTEVYSNTGGQSSKSTPLGAIAQFAAKGKRVRKKDLGL MATTYGYVYVAQVAMGADNAQTLKAIREAEAYPGPSLIIAYSPCINHGLKIKGGMGRSQAQEANAVACGYWHLWRYNPQL AEEGKNPFSLDSKVPDWSKFQDFLRSEVRFLSVLKAYPNEGEELFKACEDMAKLRYQSYVRKTKEDWSEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 55 |
