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Name : clpB (HMPREF9137_1129) Accession : YP_004328830.1 Strain : Prevotella denticola F0289 Genome accession: NC_015311 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1327568 - 1330156 bp Length : 2589 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGACATTTGAGAAATTTACAATTAAAGCACAGGAGGCTGTCCAGAGTGCGGTGAACACCGCACAGCGCAACGGGCAGCA GACCATCGAGCCGCTACATCTGCTTGCCGGCGTGATGGACAAGGGAAAGGATGTGACGAACTACGTCTTCCAGAAACTGG GCGTGAACGCACAGACCGTAGAGAATGCCGTCCAGAGCGAAATGAGCCATCTGCCGAAAGTATCGGGCGGTGAGCCTTAT TTCTCCTCTGAAGCCAATCAGGTGATGCAGCGCACGTTGGACATCTCGCAGAAGATGGGCGACGAGTTCGTCAGTATCGA GCCGATGCTGCTGGCACTGCTGGCGGTCAACTCAACGGCAAGCCGGATTCTGAAAGATGCCGGATGTGCAGAGAAAGAGA TGACAGCAGCCATCAACGACCTGCGACAGGGACAGAAGGTACAGACGCAGAGCGGTGACGAGAACTACCAGTCGCTGCAG AAATTTGCCCGCAACCTTGTCGAGGATGCCCGTGCAGGAAAGCTCGATCCGGTAATCGGCCGTGACGAGGAAATCCGCCG TGTACTGCAGATACTGTCCCGCCGTACGAAGAACAACCCGATTCTCATCGGTGAACCGGGCACAGGAAAGACGGCTATCG TCGAGGGACTTGCCGAAAGAATTGTCCGTGGCGATGTACCGGAAAACCTGAAGGACAAGCAGCTCTACTCGCTGGATATG GGGGCGATGCTCGCCGGAGCAAAATACAAAGGTGAGTTTGAGGAGCGACTGAAGAGCGTCATCAAGGAGGTGACGAAGGC CGAAGGCAACATCATCCTCTTCATTGATGAAATCCACACGCTGGTCGGTGCAGGCGGCGGCGAGGGTGCCATGGATGCCG CCAACATTTTGAAGCCGGCTCTGGCACGTGGCGAACTGAGGGCCATCGGTGCGACAACATTGAACGAGTACCAGAAATAC TTCGAGAAGGACAAGGCCCTGGAGCGTCGTTTCCAGACTGTCATGGTGGATGAGCCGGACGAGCTGGATGCCATCTCCAT CCTCCGCGGACTGAAAGAACGCTACGAGAACCACCACAAGGTACGTATCCAGGACGATGCCTGCATTGCGGCCGTGAAGC TCTCAGAACGTTATATCTCCGACCGTTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCAGCTGCCAAGCTGCGC ATGGAGCGCGATTCCGTACCCGAGGAACTGGACGAGATAACCCGCCGGCTGAAACAGCTCGAGATTGAGCGTGAGGCCAT CAAGCGGGAAGACGACAGCGAGAAGATCGCACAGCTCGACAAGGAGATTGCCGAACTCAGGGAACAGGAGCACAGCTTCC GTGCAAAATGGGAAGGCGAACGTGCCCTGGTGAACAAGATTCAGCAGGACAAGCAGGAGATGGAGAACCTCAAGTATGAG GCCGACCGTGCCGAGCGTGAGGGCAACTACGAGCGTGTCGCTGAGATCCGCTACTCGAGGCTGAAACAGCTGGAAGACGA CATCAAGAACATCCAGCAGCAGCTGCAGGCTACGCAGGGCGGACAGGCCATGGTGCGTGAGGAGGTTACCGAGGACGACA TCGCCGAGGTAGTAAGCCGCTGGACAGGCATTCCTGTCACGAAGATGCTGCAGAGCGAAAAGGACAAGCTGCTCCATCTG GAGGACGAACTCCACAAGCGTGTCATCGGACAGGACGAGGCCATCACGGCCGTGGCAGATGCCGTGCGCCGTTCACGTGC CGGCCTGCAGGATCCGAAGAAACCTATTGCATCGTTCATCTTCCTCGGAACAACGGGTACAGGTAAGACCGAACTGGCAA AGGCATTGGCTGACTATCTTTTCAACGACGAGTCGATGATGACCCGGATTGACATGAGCGAGTATCAGGAGAAATTCAGC GTCACACGACTTATCGGTGCGCCTCCGGGGTACGTAGGTTACGATGAAGGAGGCCAGCTGACCGAGGCCGTACGCCGCAA ACCTTACTCGGTCGTGCTCTTCGACGAGATAGAAAAGGCGCATCCCGACGTGTTCAACATCCTCTTGCAGGTACTGGACG ACGGACGACTGACGGACAACAAGGGGCGGACGGTGAACTTCAAGAACACGATTATCATCATGACGTCCAATCTGGGGTCG CAGTATATCCAGCAGCAGTTCGAGAATCTCACCGATTCCAACCGTGAGGAAGTCATCGAAAAGGCGAGGACTGCCGTGAT GGAAATGTTGAAGAAGACCATCCGTCCGGAGTTCCTCAACCGTATCGACGAGACCATCATGTTCCTGCCGTTGACAAAGG AGCAGATCGGAGGTGTCGTACGGCTGCAGCTGGAGCGTGTGAAGGCTATGCTCGAACCACAGGGCATCAACCTCCAGTGG ACCGACCCTGCCATCAGCTATCTGGCCGGGGTAGGCTACGATCCGGAGTTCGGCGCACGTCCCGTCAAGCGGGCTATCCA GCGGTATGTGCTGAACGACCTCAGCAAGTCTCTGCTTTCAGGCAGTGTCAACCGCGACAAGCCGGTCATCATCGACTGCT TCGGTGAGGGACTGACCTTCAGGAACTAA Protein sequence : MTFEKFTIKAQEAVQSAVNTAQRNGQQTIEPLHLLAGVMDKGKDVTNYVFQKLGVNAQTVENAVQSEMSHLPKVSGGEPY FSSEANQVMQRTLDISQKMGDEFVSIEPMLLALLAVNSTASRILKDAGCAEKEMTAAINDLRQGQKVQTQSGDENYQSLQ KFARNLVEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAERIVRGDVPENLKDKQLYSLDM GAMLAGAKYKGEFEERLKSVIKEVTKAEGNIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQKY FEKDKALERRFQTVMVDEPDELDAISILRGLKERYENHHKVRIQDDACIAAVKLSERYISDRFLPDKAIDLMDEAAAKLR MERDSVPEELDEITRRLKQLEIEREAIKREDDSEKIAQLDKEIAELREQEHSFRAKWEGERALVNKIQQDKQEMENLKYE ADRAEREGNYERVAEIRYSRLKQLEDDIKNIQQQLQATQGGQAMVREEVTEDDIAEVVSRWTGIPVTKMLQSEKDKLLHL EDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADYLFNDESMMTRIDMSEYQEKFS VTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGS QYIQQQFENLTDSNREEVIEKARTAVMEMLKKTIRPEFLNRIDETIMFLPLTKEQIGGVVRLQLERVKAMLEPQGINLQW TDPAISYLAGVGYDPEFGARPVKRAIQRYVLNDLSKSLLSGSVNRDKPVIIDCFGEGLTFRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-159 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004328830.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 1e-119 | 45 |
| clpB | YP_004328830.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-101 | 43 |
