Gene Information

Name : vicR (SOR_0948)
Accession : YP_004325948.1
Strain : Streptococcus oralis Uo5
Genome accession: NC_015291
Putative virulence/resistance : Virulence
Product : OmpR family DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 918658 - 919365 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAATATTAATTGTTGATGATGAGAAACCAATCTCAGATATTATTAAGTTTAATATGGCCAAGGAAGGTTATGA
AGTTGTTACAGCCTTCAATGGTCGTGAGGCAATCGAGCTATTTGAAGCAGAGCAACCAGATATTATTATCCTCGACTTGA
TGCTACCTGAAATTGATGGTTTAGAAGTTGCTAAAGCTATTCGTAAGACTAGTAGCGTGCCGATTATCATGCTATCAGCT
AAGGATAGCGAATTTGACAAGGTTATTGGTTTAGAGTTAGGTGCAGACGATTATGTTACAAAACCTTTCTCAAACCGTGA
GTTGCAAGCACGTGTTAAGGCTCTGCTTCGTCGTACAGACATAGTTTCTGTGGATAGCCAAGAGTCCGATGAGAAGAAGA
CGCAACCTTTACAAATTGGTGATTTGGAAATCGTTCCAGATGCTTACGTGGCTAAGAAATATGGTGAGGAATTAGATTTG
ACCCACCGTGAGTTTGAACTCTTGTATCACTTGGCGTCTCATATTGGTCAAGTGATTACACGTGAACACTTGCTTGAGAC
TGTATGGGGTTATGACTATTTTGGTGATGTTCGTACAGTGGACGTGACCATTAGACGCTTGCGTGAGAAAATAGAAGACA
CTCCAAGTCGCCCAGAGTACATTCTCACACGTCGTGGTGTTGGCTACTATATGAGAAATAATGATTGA

Protein sequence : 
MKKILIVDDEKPISDIIKFNMAKEGYEVVTAFNGREAIELFEAEQPDIIILDLMLPEIDGLEVAKAIRKTSSVPIIMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRTDIVSVDSQESDEKKTQPLQIGDLEIVPDAYVAKKYGEELDL
THREFELLYHLASHIGQVITREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMRNND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_012469.1.7685629. Protein 4e-101 92
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_002952.2859905.p0 Protein 4e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_002758.1121668.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_009641.5332272.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_013450.8614421.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_007793.3914279.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_002745.1124361.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_009782.5559369.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_002951.3237708.p0 Protein 3e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_007622.3794472.p0 Protein 4e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_003923.1003749.p0 Protein 2e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator HE999704.1.gene2815. Protein 7e-55 55
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_012469.1.7686381. Protein 5e-47 50
vicR YP_004325948.1 OmpR family DNA-binding response regulator AE016830.1.gene1681. Protein 1e-48 48
vicR YP_004325948.1 OmpR family DNA-binding response regulator FJ349556.1.orf0.gene Protein 3e-44 45
vicR YP_004325948.1 OmpR family DNA-binding response regulator AM180355.1.gene1830. Protein 8e-39 44
vicR YP_004325948.1 OmpR family DNA-binding response regulator HE999704.1.gene1528. Protein 5e-37 43
vicR YP_004325948.1 OmpR family DNA-binding response regulator DQ212986.1.gene4.p01 Protein 6e-38 43
vicR YP_004325948.1 OmpR family DNA-binding response regulator AF155139.2.orf0.gene Protein 9e-43 43
vicR YP_004325948.1 OmpR family DNA-binding response regulator CP001138.1.gene4273. Protein 2e-35 42
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_005054.2598277.p0 Protein 1e-38 42
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_014475.1.orf0.gen Protein 1e-38 42
vicR YP_004325948.1 OmpR family DNA-binding response regulator NC_002695.1.915041.p Protein 2e-35 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator CP000647.1.gene4257. Protein 6e-35 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator CP000034.1.gene3834. Protein 2e-35 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator CP004022.1.gene3215. Protein 1e-38 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator BAC0533 Protein 6e-35 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator CP001918.1.gene5135. Protein 1e-30 41
vicR YP_004325948.1 OmpR family DNA-binding response regulator AF162694.1.orf4.gene Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_004325948.1 OmpR family DNA-binding response regulator VFG1389 Protein 8e-33 44
vicR YP_004325948.1 OmpR family DNA-binding response regulator VFG1563 Protein 4e-37 42