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Name : SOR_1173 (SOR_1173) Accession : YP_004326171.1 Strain : Streptococcus oralis Uo5 Genome accession: NC_015291 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1149197 - 1149664 bp Length : 468 bp Strand : - Note : Transfer-messenger RNA (tmRNA, 10Sa RNA, ssrA) is bacterial RNA having both tRNA and mRNA properties and playing an essential role in recycling of 70S ribosomes that are stalled on defective mRNA DNA sequence : ATGGCAAAGGGCGAGGGAAAGGTCGTCGCACAAAATAAAAAAGCGCACCACGACTATACAATCGTAGATACGCTAGAGGC AGGAATGGTCCTGACCGGAACTGAAATCAAGAGCGTTCGAGCTGCTCGAATCAATCTCAAGGACGGCTTTGCTCAAGTAA AAAATGGGGAAGTCTGGCTGAGCAATGTCCATATCGCCCCTTACGAAGAGGGCAATATCTGGAACCAGGAACCGGAACGA CGTCGCAAACTTCTGCTCCATAAGAAGCAAATTCAAAAATTGGAACAAGAGACCAAAGGGACAGGAATGACCCTTGTTCC CCTTAAAGTCTATATCAAAGATGGTTATGCTAAACTCCTTTTAGGACTTGCTAAAGGGAAACATGACTATGACAAACGGG AGTCGATCAAGCGTCGTGACCAAAACCGCGACATCGCGCGTGTGATGAAAGCTGTCAACCAGCGTTAA Protein sequence : MAKGEGKVVAQNKKAHHDYTIVDTLEAGMVLTGTEIKSVRAARINLKDGFAQVKNGEVWLSNVHIAPYEEGNIWNQEPER RRKLLLHKKQIQKLEQETKGTGMTLVPLKVYIKDGYAKLLLGLAKGKHDYDKRESIKRRDQNRDIARVMKAVNQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-25 | 60 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-23 | 49 |
