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Name : serS (HMPREF9243_0094) Accession : YP_004320506.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 96177 - 97475 bp Length : 1299 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGATTGATGTACGTTTATTACGGGATAATTTTGATCAAGTGGCTGAGGCTTTGAAGGGCCGGGGGGTTGAGAAAGAAAC CCTAGAACACTTACGCGACCTGGACCAAAAACGCCGCCAAGTGATTGTCGAAGCGGAAAACTTGAAAAAGGAACGGAATA TCGCTTCTGACGCTATTGGTCAACTCAAGCGCAATAAGGAAAATGCCGACGACAAGATCCAAGAAATGAAGGCCTTAGGG ACCAAGATCAAGGCCTTGGACAGCGACTTAGACCAACTTGACCAAGAAGAGCATGATATCCTGGCGCGGATTCCTAACCT ACCAGCTGAAGGCGTACCGGTCGGTGCAGATGAAGATGAAAATGTGGAAATCCACCGTCACGGGGAAACCCCTGAATTCA ACTTTGAACTCAAAGCCCACTGGGACTTAGCCGAAGATTTAGATATCCTTGATTGGGATGCAGGGGCTAAGGTGTCAGGT TCTCGTTTTGTCTACTATAAGGGTCTGGGGGCACGTTTGGAACGGGCTTTGTATAACTTCATGTTGGACCAACACCAAAA AGAAGGCTACATGGAAATGATTACGCCTTTCTTAGTCAACGACCAAGCCATGTATGGGACTGGACAATTCCCTAAATTCA CCGAAGACGTTTACCAAATCACCAATGAAGGGCAAGACCTGACCTTGATTCCTACTGCAGAAGTGCCGTTAACGAACTAC TTTGCTAAGGAAATCTTGAAGGAAGAAGACCTGCCTATCCGGGTAACGGCTCTCTCACCTTGTTTCCGTTCTGAAGCCGG TTCAGCGGGACGGGACACCCGGGGTTTGATCCGGATGCACCAATTCCAAAAGGTAGAAATGGTTAAAGTAGCGACTCCAG ACCAATCCTTCGATGAACTGGAAGCCATGACTAAAAACGCAGAAAATATTCTCGACTTACTCGGTTTACCTTACCGTCGC ATTATCCTCTGTACCGGGGATATGGGCTTCTCAGCAGCCAAGACCTATGATATCGAAGTTTGGATGCCCGCCCAAAATAC CTACCGGGAAATTTCTTCCTGCTCTAACTGTGTGGACTTCCAAGCACGCCGGGCCCAAGTCCGCTACCGGGACATTGATG GCAAGACCCAACTGGCCCATACTTTAAACGGGTCTGGTTTAGCAGTGGGTCGGACAGTCGCTGCCGTCTTAGAAAACGGA CAAAACGCGGACGGTTCCATTACCATCCCTGAAGTGCTGGTGCCTTACATGGGTGGGGTAGATAAAATTACCAAGGAAAA CGCCCGGGGCTTAAATTAA Protein sequence : MIDVRLLRDNFDQVAEALKGRGVEKETLEHLRDLDQKRRQVIVEAENLKKERNIASDAIGQLKRNKENADDKIQEMKALG TKIKALDSDLDQLDQEEHDILARIPNLPAEGVPVGADEDENVEIHRHGETPEFNFELKAHWDLAEDLDILDWDAGAKVSG SRFVYYKGLGARLERALYNFMLDQHQKEGYMEMITPFLVNDQAMYGTGQFPKFTEDVYQITNEGQDLTLIPTAEVPLTNY FAKEILKEEDLPIRVTALSPCFRSEAGSAGRDTRGLIRMHQFQKVEMVKVATPDQSFDELEAMTKNAENILDLLGLPYRR IILCTGDMGFSAAKTYDIEVWMPAQNTYREISSCSNCVDFQARRAQVRYRDIDGKTQLAHTLNGSGLAVGRTVAAVLENG QNADGSITIPEVLVPYMGGVDKITKENARGLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-135 | 65 |
