|
Name : HMPREF9243_0874 (HMPREF9243_0874) Accession : YP_004321167.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : - Position : 890222 - 891388 bp Length : 1167 bp Strand : + Note : identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGAAAATTACAGTCACTGGTACAGGATATGTTGGTTTATCCAATGCGATTTTGTTGGCACAGCATCATCAAGTTACGGC TATTGATATTGTTCAAGACAAGGTGGATTTAATTAATGAAGGTAAGTCACCGATTGAAGATAAGGAAATTATTGATTATT TAGCCAATGCGGACCTAAATCTAAAAGCGACAACTGAACATCAAGAAGCATATCGCCAAGCGGATTTTTCCATTATTTCC ACGCCAACAAACTATGATGATGAGACCAACCATTTCGATACTTCTGCGGTTGAATCAGTGATTGAGGATATTCTAGCCAG TGGCTCCAAGGCAACCATTGTGATTAAATCGACCATCCCGGTGGGTTATACGGAATCCATTCGTAAGAAATATAAAACCG ATCGGATTATTTTTTCACCGGAATTCTTGCGTGAAGGGCGCGCTTTGTACGATAATTTACATCCTAGTCGGATCGTTGTG GGCTCTCACGGGGAAGCCGGGCAATGCTTTGCGGATTTATTAGTAGAAGGGGCCTTGGAGGATGATATTCCGGTTCTATT AACCCATTCTACCGAGGCTGAAGCCATTAAATTATTTGCCAATACTTACTTGGCCATGCGGGTGTCTTTCTTCAATGAGT TGGATTCTTATGCGGAGATTAAAGGGCTTAATGCAGCTGAAATTATCGATGGGATCGGTTTAGATCCACGAATTGGTTCT CACTATAACAATCCTTCCTTTGGCTATGGGGGCTACTGCTTACCCAAGGACACCAAGCAGCTGTTAGCTAACTATGAAGA TGTGCCGCAAAATATCATTAGCGCTATAGTCCAAGCCAATCGGACGCGTAAGGATCATATTGCTAAGCAAGTCCTTAAAC GTAATCCGCAAGTGGTGGGTATTTACCGCTTAACTATGAAGGAAGATTCGGATAATTTCCGCCAATCCGCTATTCAAGGG GTCATGAAGCGCATCATGGCAGAAGGCGTCCCGGTGATTATCTACGAGCCTGTTGCTGAGGAAGATACTTTCTATAATTG TGAAGTCTACCGCGACCTGAATCAATTTAAAGCTGACGCCGATGTGATAATCGCTAATCGCTGGGATGAAGACTTAGCGG ATGTGAATGATAAGGTCTATACTCGGGATATTTATCATGAGAATTAG Protein sequence : MKITVTGTGYVGLSNAILLAQHHQVTAIDIVQDKVDLINEGKSPIEDKEIIDYLANADLNLKATTEHQEAYRQADFSIIS TPTNYDDETNHFDTSAVESVIEDILASGSKATIVIKSTIPVGYTESIRKKYKTDRIIFSPEFLREGRALYDNLHPSRIVV GSHGEAGQCFADLLVEGALEDDIPVLLTHSTEAEAIKLFANTYLAMRVSFFNELDSYAEIKGLNAAEIIDGIGLDPRIGS HYNNPSFGYGGYCLPKDTKQLLANYEDVPQNIISAIVQANRTRKDHIAKQVLKRNPQVVGIYRLTMKEDSDNFRQSAIQG VMKRIMAEGVPVIIYEPVAEEDTFYNCEVYRDLNQFKADADVIIANRWDEDLADVNDKVYTRDIYHEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0068 | YP_300158.1 | UDP-glucose 6-dehydrogenase | Not tested | SCC15305cap | Protein | 6e-91 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF9243_0874 | YP_004321167.1 | nucleotide sugar dehydrogenase | VFG0963 | Protein | 7e-98 | 53 |
