Gene Information

Name : HMPREF9243_0861 (HMPREF9243_0861)
Accession : YP_004321159.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.4.1.-
Position : 879523 - 880152 bp
Length : 630 bp
Strand : +
Note : identified by match to protein family HMM PF02397

DNA sequence : 
ATGTATATAAAAGTAAAAAGACTTATTGATTTTATACTAGCGCTTATTGCCCTAATCATACTTTCTCCTCTATTTTTATT
GATAGCACTCTGGATAAAACTGGACTCCAAAGGCCCAGTTTTCTTTAAACAAAAGCGCATTGGTAAAAATAGAGATTTTT
TTTATATTTACAAGTTTCGCTCCATGCTGTCTGAAACACCAGCCGATATGCCGACGCATTTATTAAAAGATCCTGCAGCC
TTTATCACTAAGCCGGGAGCCTTCTTAAGAAAAACGAGTTTGGATGAACTCCCCCAATTAATTAATATCTTAAAAGGCGA
GATGGCTTTTATTGGTCCTCGTCCCGCTCTCTGGAACCAAGATGACCTGGCGGATGAACGGGATAAATACGGAGCTAACG
ATATTCTCCCGGGATTAAGCGGTTGGGCGCAAATCAATGGTCGTGATGAACTTCCTATTGATGTAAAGGCTCGCCTTGAT
GGACAATATGTGGAGAATATGGGGCCAATGATGGATATAAAATGTTTCTTTGGGACTATTGTTAGTGTCATTCGTCATGA
AGGAGTTGTTGAAGGCGGAACTGGAGCTATTGAAAAGGCCAAGCAAGAGTTGGAGGAAGAAGATAAATGA

Protein sequence : 
MYIKVKRLIDFILALIALIILSPLFLLIALWIKLDSKGPVFFKQKRIGKNRDFFYIYKFRSMLSETPADMPTHLLKDPAA
FITKPGAFLRKTSLDELPQLINILKGEMAFIGPRPALWNQDDLADERDKYGANDILPGLSGWAQINGRDELPIDVKARLD
GQYVENMGPMMDIKCFFGTIVSVIRHEGVVEGGTGAIEKAKQELEEEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-29 51
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-29 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_0861 YP_004321159.1 sugar transferase VFG1369 Protein 3e-43 60
HMPREF9243_0861 YP_004321159.1 sugar transferase VFG1309 Protein 9e-31 48