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Name : HMPREF9243_0860 (HMPREF9243_0860) Accession : YP_004321158.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 877688 - 879505 bp Length : 1818 bp Strand : + Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAAATTAACCCGCAGAAGGAAGCAGGCAACGATCATCTTAAGTGATGCCCTGAGTGTCTTACTAAGTGCGAGCTTGTC GGTATACTTGATCAAGTTCTACGTCCATAACAATTTATTCCAATACGTAACCATTGCCAGCATCTACCTACTGGTCTATT TATTAGTTTCTTTTAAGCAGCATAGCTTTTCTGGTATTATTCGTTTCTTTAACTTCTCGGATGCTAGACAGTTGGTCCTA GGAAATGTCATTGCCGGTGTCATCGCCTTTATCTGTGGCACCATGGTCTTCAGCCGAGTAAGCAACCGCTACAGTTTCCT CTTATTATTCTTTTCGACGGCCTTTATGCTATTGGCACGGATGTTATGGCGGACTTATGTCGATGAAAAGAACCATGTCA GATCTAAGAGCGATAATAATGCGCCTCGCTTATTATTAGTTGGGGCTGGGGATGCCGGCAACTTATTCATCGAAAGTTTT GCTAAGGCTGGCGATCGCTTTACTATTGTGGGTTTGGTGGATGACGATCCTAATAAACAGGGCGTTTACTTACGGGGGTA TCCTGTTCTTGGACCAATCGACCAAATCCCTCAAATCATTGATGCCAAACGGGTGGACCAAATTACCATTACCGCACCAT CCCTCCCTTCAGAAAAGGTGGAAGAAGTCATTCGCCTAGCTAACGAAAAGGATATTTCAGTCAAGCAAATGCCAGAAGTG GAACGAGTTATGGCCGGTGACTTACAAGTGGCAATGCGGGACATTGAAATCAATGACCTCCTCGGTCGGGAAGAAGTTGA ACTCGATGACCAAGCAGCTATCGATACTATTGGTGGAAAAACCATCCTAGTCACTGGAGCAGGGGGATCAATCGGTTCAG AAATCTGCCGACAACTCTTGAAATTTGGACCTGCTAAGTTACTCTTACTGGGACACGGAGAGAATTCCATCTATCTTATT GATCGGGAACTTAACCAGCTCAACCAAAGTGGGGTTCAAATTGTTCCCATTATTGCCGATATTCAAGACCGTGACCACAT TAACGACTTAGTCAAATTTTACCAACCTAATATTATCTACCACGCCGCAGCCCATAAGCATGTGCCCTTGATGGAATATA ATCCGACTGAAGCGGTTAAGAATAATATCTACGGAACCTATAATGTGGCCCGGGCTGCGGAAGAAAATGGAGTGGAACGC TTTGTCATGATTTCCACTGATAAGGCCAATAATCCGCCCAATGTCATGGGGGCAACCAAACGGATTGCCGAAATGATTGT GACCGGCCTCAATGAAAACAGTCAATGTACCTTCTCTGCCGTACGTTTCGGGAATGTCTTAGGTAGCCGGGGCTCCGTGA TCCCGCTCTTCAAGAAACAAATTGCGGCTGGAGGGCCAGTGACCGTCACCCATCCGGACATGCGGCGCTACTTCATGACT ATTCCTGAAGCTAGTCGACTAGTTATTCAAGCCAGCTCTTTAGCTGAAGGTGGGGAACTATTCATCCTCAACATGGGTAA GGAAGTCTACATCAAGGATCTAGCTCGTAAAATGATCACCCTTAGTGGTTACAGTGAAGATGAAATTGAGATCAAATACG TGGGCATGCGTCCAGGGGAGAAACTCTATGAAACCCTGCTCCTGGATGATGAAACCACTGACCGCCAAGTAGACGACAAG ATTTTCGTGGGTAAGGTTCATAATAAGAGCTTGAAGGAAATTAGAAGCTTTGTGGAAGGTTTAGACCTCAGTGGTCATGA TGATAAGTTAAGTGAGAAGTTAACCACCTTTGTTCATCGGAATGTGGAAGTGGAGTAA Protein sequence : MKLTRRRKQATIILSDALSVLLSASLSVYLIKFYVHNNLFQYVTIASIYLLVYLLVSFKQHSFSGIIRFFNFSDARQLVL GNVIAGVIAFICGTMVFSRVSNRYSFLLLFFSTAFMLLARMLWRTYVDEKNHVRSKSDNNAPRLLLVGAGDAGNLFIESF AKAGDRFTIVGLVDDDPNKQGVYLRGYPVLGPIDQIPQIIDAKRVDQITITAPSLPSEKVEEVIRLANEKDISVKQMPEV ERVMAGDLQVAMRDIEINDLLGREEVELDDQAAIDTIGGKTILVTGAGGSIGSEICRQLLKFGPAKLLLLGHGENSIYLI DRELNQLNQSGVQIVPIIADIQDRDHINDLVKFYQPNIIYHAAAHKHVPLMEYNPTEAVKNNIYGTYNVARAAEENGVER FVMISTDKANNPPNVMGATKRIAEMIVTGLNENSQCTFSAVRFGNVLGSRGSVIPLFKKQIAAGGPVTVTHPDMRRYFMT IPEASRLVIQASSLAEGGELFILNMGKEVYIKDLARKMITLSGYSEDEIEIKYVGMRPGEKLYETLLLDDETTDRQVDDK IFVGKVHNKSLKEIRSFVEGLDLSGHDDKLSEKLTTFVHRNVEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-98 | 52 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-102 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF9243_0860 | YP_004321158.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 5e-99 | 52 |
