Gene Information

Name : HMPREF9243_0858 (HMPREF9243_0858)
Accession : YP_004321156.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 876201 - 876845 bp
Length : 645 bp
Strand : +
Note : identified by match to protein family HMM TIGR01007

DNA sequence : 
GTGGTCGTGGATAATCCCACCTCAGCTATGGCAGAACAATTCCGGACCATCCGGACCAATATCCAGTTCTCTATGTTGGA
CAAGGAATTAAAAACATTTAATGTGACTTCACCGGGACCCGCTTCGGGAAAGTCCTTCTTATCGGCTAATATCGCAGCTG
CCTTTGCTAGTGATGATAAGCGGGTGCTCTTATTGGATGCCGATATGCGTAAACCCACCGTTCATAAGACTTTTGGCGTG
CCTAACGATCGGGGCCTAACTAACCTTCTAACCGATAGTCGGCTGGAAATCCACCAAGTGATTAAGAAATCCTATGTACC
GAACTTATTCTACTTAACCTGTGGCGCTATTCCACCTAATCCTTCAGAGCTCTTAGCTTCCAAACGGATGCAGGAATTGA
TGGATCAATTGCGCAATGTCTTTGACATCATTGTCTTGGACTGCCCACCAGTCCTGGCCGCTACCGATGCCCAAGTGGTA
TCCGCCCGGGTTGACGGGACGGTGGTTGTGGTGCCGTACGGCCAATGTACTAAGGATGAAGTTAAGGAAAGCCAGGCCCT
ACTAGACAAGGTCAACACCAATGTGCTTGGAGTCATTATGAACCGGACCGAAAGAACTGAAGACTACTATTACTACTACG
AGTAA

Protein sequence : 
MVVDNPTSAMAEQFRTIRTNIQFSMLDKELKTFNVTSPGPASGKSFLSANIAAAFASDDKRVLLLDADMRKPTVHKTFGV
PNDRGLTNLLTDSRLEIHQVIKKSYVPNLFYLTCGAIPPNPSELLASKRMQELMDQLRNVFDIIVLDCPPVLAATDAQVV
SARVDGTVVVVPYGQCTKDEVKESQALLDKVNTNVLGVIMNRTERTEDYYYYYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_0858 YP_004321156.1 capsular exopolysaccharide family protein VFG1298 Protein 1e-33 42