Gene Information

Name : HMPREF9243_0753 (HMPREF9243_0753)
Accession : YP_004321062.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 764789 - 765664 bp
Length : 876 bp
Strand : +
Note : identified by match to protein family HMM PF01680; match to protein family HMM PF05690; match to protein family HMM TIGR00343

DNA sequence :
ATGACAAAGACACAATATGAATTAAACCAAGCCCTAGCTCAGATGTTGAAGGGTGGGGTGATTATGGATGTTACCACACC
AGAACAAGCCCGGATTGCTGAAGCAGCAGGTGCAGCAGCGGTTATGGCCCTGGAACGGATTCCAGCTGATATCCGAGCAG
CCGGTGGGGTTTCCCGGATGAGTGATCCTAAAATGATTAAGGGTATCCAAGAAGCAGTTTCCATCCCGGTTATGGCCAAG
GTTCGCATCGGTCACTTTGTGGAAGCTCAGATTCTCGAAGCCATTGAAATTGACTATATCGATGAATCCGAAGTTCTCTC
GCCAGCAGATGATGTTTACCATATTGATAAGACCGCCTTCAAGGTACCTTTTGTTTGTGGGGCCCGTGATTTAGGGGAAG
CTTTGCGCCGGATTGAAGAGGGAGCTTCTATGATTCGGACCAAGGGGGAACCTGGCACAGGCGACGTGGTCCAAGCCGTC
CGTCACTTACGTAAGATTAATGCCCAAATTCGTCAAGTTGCTTCCCTAGCAGAAGATGAGCTCTATGAAGCCGCAAAACA
ACTTCAAGTGCCTTATCATTTAATCCAATATGTCCATGATCACGGGAAATTACCAGTAGTGAACTTTTCCGCTGGGGGGG
TAGCTACCCCAGCGGATGCCGCTTTAATGATGCAATTAGGGGCGGAAGGAGTCTTTGTTGGTTCCGGAATCTTCAAGTCA
GGAGATCCCGCTAAGCGGGCCAGTGCCATCGTTCAAGCGGTCACCAACTACCAAGATGCCCAATTAATTGCCCAACTATC
CGAAGACTTGGGTGAAGCCATGGTCGGGATTAATCCGAGCGAGATCCAAATTATTATGGAAGAGCGAGGCCAGTAA

Protein sequence :
MTKTQYELNQALAQMLKGGVIMDVTTPEQARIAEAAGAAAVMALERIPADIRAAGGVSRMSDPKMIKGIQEAVSIPVMAK
VRIGHFVEAQILEAIEIDYIDESEVLSPADDVYHIDKTAFKVPFVCGARDLGEALRRIEEGASMIRTKGEPGTGDVVQAV
RHLRKINAQIRQVASLAEDELYEAAKQLQVPYHLIQYVHDHGKLPVVNFSAGGVATPADAALMMQLGAEGVFVGSGIFKS
GDPAKRASAIVQAVTNYQDAQLIAQLSEDLGEAMVGINPSEIQIIMEERGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-85 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-84 70
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-85 69