Gene Information

Name : HMPREF9243_0704 (HMPREF9243_0704)
Accession : YP_004321020.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 713051 - 713719 bp
Length : 669 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAGCAATCGAATTAATAAATGTCTCTAAATCCTTTCAAGACGGCGATCAAATGATAGTGGCCTTAAAGCCGACTAA
TTTTTCCGTGAGTGACGGAGAATTTGTCGCCATTGTTGGTCCCTCAGGTTCAGGGAAGTCGACCTTCTTAACCCTGAGTG
GCGGTTTACAAAGTCCAAGTCAGGGTGAGATTAGGGTCAAGGGCCAAGCCTTTTCCAGTTTAAAGGAAAAAGACAGAGCG
AAGCGCCGTTTCCAAGAAATTGGCTTTATCTTACAAGCTTCTAACTTAATTCCCTATTTAACGGTTAAAGATCAATTACG
CTTAGTCGATAAAATCCAAGGCCACAGTCAAGCAGCCTATGCCCAAGATCTATTCCAGGAATTGGAAGTGGACCAATTAT
TAAATAAATATCCAGCCGATTTGTCAGGTGGGGAACGGCAAAGGGTAGCCATCGCTCGGGCTCTATATCCTGATCCTACT
ATCATCCTGGCTGATGAGCCGACTGCTTCCTTAGATAGTCAAAGAGCTTATGAAGTGGTCAATATATTAGCTCGGGAAAG
TAAGGAGAAGAATAAGGCCATCATTATGGTTACCCACGACACTCGTTTAATTAAGCATTGTGACCGAGTCTTTGAAATGC
GGGATGGTGTCCTAGAGGAAAGTCATTAA

Protein sequence : 
MKAIELINVSKSFQDGDQMIVALKPTNFSVSDGEFVAIVGPSGSGKSTFLTLSGGLQSPSQGEIRVKGQAFSSLKEKDRA
KRRFQEIGFILQASNLIPYLTVKDQLRLVDKIQGHSQAAYAQDLFQELEVDQLLNKYPADLSGGERQRVAIARALYPDPT
IILADEPTASLDSQRAYEVVNILARESKEKNKAIIMVTHDTRLIKHCDRVFEMRDGVLEESH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 8e-50 53
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-52 51
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_0704 YP_004321020.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 42