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Name : lysS (HMPREF9243_0501) Accession : YP_004320843.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 502593 - 504095 bp Length : 1503 bp Strand : + Note : identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGGCAAAGGAAAACCAACAGCATGAAGCGATGAATGACCAAATGCAAGTCCGTCGCGAAAAAGTAGATGAATTAATAGA AAATGGCTACCAACCATTTGCGAAAGGCTTTAAGCGCGATGCCCTCGCTCAAGAAATCCATGACCAGTATGAAGCTTTTG ACAAGGATGAACTGGCTGATAAGGCAGTCTTTGTTAATATTGCTGGCCGCCTCATGACAAAAAGAGGGAAGGGCCGGGCC GGTTTTGGTCATATCCAGGATGGCTCTGGTCAAATTCAAATTTATGTTCGTAAAGACGAAATTGGCGACAAGGATTATGT GGATATCTGGAAGAAGGCTGACCTCGGTGATATTATCGCTGTTTCAGGTTATGTGATGCGGACCAATACCGGTGAATTAT CGGTTAAGGCAGAAGAATTAAAACATCTAACCAAGGCGCTGCGCCCACTTCCTGACAAGTACCATGGCTTACAAGATAAG GAACAAATCTACCGTCAACGCCATTTGGACTTGATTACTAACCGGGAGAGCTATGACCGCTTTGTTACCCGGTCAAAGAT CATCAGTGAAATCCGTCGTTTCCTCGATCAACGTGGCTACTTAGAAGTGGAAACCCCAGTTTTACATAACATTCCTGGGG GAGCCAATGCCCGTCCTTTCGTTACTCACCATAATGCTTTAGACATTGATTTATACCTACGTATTGCTTTGGAACTCCAC CTCAAACGCTTAATCGTCGGAGGAATGGAAAAAGTTTATGAAATTGGTCGGGTCTTCAGAAATGAAGGGATTGACCACAC CCACAATCCTGAGTTCACCTTGTTAGAACTCTATACTGCTTATAGCGATATGTGGGACGTGATGGACTTAGTCGAAGAAT TATACCACCATATTGCGAGCCAAGTGGTGGGATCAACCACCATTCCTTATGGAGACCACCAATTAGACTTTTCTGGTCAA TGGCGCCGGGTCCACATGGTTGACGCTATTAAAGAGGCTACCGGTGTCGACTTCTGGCAAGAAATGACCGATGAAGAAGC GCGTCAACTAGCCAAAGACCACCATGTTGAAGTCAAAGGTACGGATGACTTTGGTAAGGTGGTTAACGAATTCTTTGAAA CTTTTGTGGAAGAAACCCTTATTCAACCAACCTTTGTGTATGGTCATCCGAAGTCAATCTCACCATTGGCACGGGCTAAT GAAGAAGATAGCCGCTTCACCGACCGCTTTGAGGCCTTTATTGCCGGAGCGGAAGCAGGGAACGCCTTTACTGAATTGAC TGACCCTATCGACCAACGGCAACGCTTTGAAGCCCAAGTCAAGGAAAGAGAATTGGGTGACGATGAAGCCCAACATATGG ACGAAGACTTCGTGGAAGCTCTGGAAACTGGGATGCCACCAACGGGCGGTTTAGGTATCGGGATTGACCGTTTGGTAATG ATCTTCACCAACTCCGACTCTATCCGCGACATCCTACTCTTCCCAACCATGCGTAATAAATAA Protein sequence : MAKENQQHEAMNDQMQVRREKVDELIENGYQPFAKGFKRDALAQEIHDQYEAFDKDELADKAVFVNIAGRLMTKRGKGRA GFGHIQDGSGQIQIYVRKDEIGDKDYVDIWKKADLGDIIAVSGYVMRTNTGELSVKAEELKHLTKALRPLPDKYHGLQDK EQIYRQRHLDLITNRESYDRFVTRSKIISEIRRFLDQRGYLEVETPVLHNIPGGANARPFVTHHNALDIDLYLRIALELH LKRLIVGGMEKVYEIGRVFRNEGIDHTHNPEFTLLELYTAYSDMWDVMDLVEELYHHIASQVVGSTTIPYGDHQLDFSGQ WRRVHMVDAIKEATGVDFWQEMTDEEARQLAKDHHVEVKGTDDFGKVVNEFFETFVEETLIQPTFVYGHPKSISPLARAN EEDSRFTDRFEAFIAGAEAGNAFTELTDPIDQRQRFEAQVKERELGDDEAQHMDEDFVEALETGMPPTGGLGIGIDRLVM IFTNSDSIRDILLFPTMRNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-112 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004320843.1 | lysine--tRNA ligase | VFG1668 | Protein | 1e-112 | 48 |
