Gene Information

Name : rpmE (HMPREF9243_0457)
Accession : YP_004320802.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0254
EC number : -
Position : 453220 - 453486 bp
Length : 267 bp
Strand : +
Note : identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105

DNA sequence :
ATGAAACAAAATATCCATCCAGATTACCATCCAGTCGTTTTTATGGACACAAGTACAGGTTTTAAATTCCTATCTGGTTC
CACAAAAACTTCTGATGAAACCGTTGAATGGGAAGACGGCAACACTTATCCATTGATTCGTGTGGAAATTTCTTCCGACT
CCCACCCATTCTATACCGGACGTCAAAAATTCACCCAAGCCGATGGACGTGTGGACCGTTTCAACAAGAAATACGGTTTT
GCCGACGCCAACGCCAAGAAAGACTAA

Protein sequence :
MKQNIHPDYHPVVFMDTSTGFKFLSGSTKTSDETVEWEDGNTYPLIRVEISSDSHPFYTGRQKFTQADGRVDRFNKKYGF
ADANAKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 7e-13 49
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 7e-13 49