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Name : clpC_1 (HMPREF9243_0430) Accession : YP_004320779.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/MecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 427826 - 430345 bp Length : 2520 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAAAGACATCTATACTGAAAAAGCCAAGACCGCGATTGGATTTGCCAAAGAAGAAGCTGAATACTTCCGTCATCCAGC CATTGGTAGCGAGCATATGCTTTTGGGCTTATACCGCGAAAGTGAAGGTGTTGCTCATGCCGTTTTAAGCGATTACTTGC CAAGTTATGAGAGTCTTCGTGAAGAGATTGAATTTGTGACCGGCTACGGGACCAGCGATTCAGCCAAGAGCCAGGAAGAC TATGTGCAGTTTTCCCCACGCATGCAAGACGTCTTGAACCAAGCCAAAGACTTGGCCAAGTCTATGCAGGCTTCCTTAAT TGGTACCGAGCACTTATTACTCGCCCTCATCAATGAGGAAACCCTGGCCAACCGCCTGCTGAAAAATCTCGATATAGATG TTAATCGTTTGCGTAGTGATGTCTATCAGATGCTGGGACAAAAAGAACCAGTTAGGAACCGGACCAAAAAGCCGCTGGGT AAGCAAAGCAAAAGCAAGACCCCAACCTTGGACAGTATTGCTAAGGACCTGACCCAAGCCGCTAAGGACGGCAAGCTGGA CCCTGTGATCGGTCGCCAGCAAGAAATGCGTCGGCTCATGCAGGTCTTAAGCCGTCGGACCAAGAATAACCCGGTCCTGG TTGGTGAACCTGGGGTCGGTAAGACCGCTATTGTCGAAGCCTTAGCCATCCAAATGAGCCAACAGCAAGTCCCAGAAAAC ATGCTGGATAAACGACTCATGGTCTTAGATATCGGCTCTTTAGTTGCTGGGACTAAGTACCGCGGTGAATTTGAAGACCG CATGAAGCATTTAATTGAAGAAATTGAAGACCAAGGTAATATTATTCTCTTTATCGATGAAATTCATACCATTATAGGGG CTGGGGGAGCTGAAGGAGCCATTGATGCCTCAAACCTCCTAAAACCTGCCCTCAGCCGGGGACAAGTTCAACTGATCGGG GCTACAACCCTCAACGAATATCAAAAATACATCGAAAAAGATGCTGCCTTGGAAAGACGTTTTGCTAAGATTTTAGTTGA AGAACCCACATTAGAGGAGACTGAAGAAATCCTTAAAGGGATCCGGCCTGCCTATGAAAAACATCACCAAGTCGCTATTC CTGATGAGAGCATTACCACCTGTGTGCGTTTAAGCTCCCGTTACTTATCGGACCGCTTCTTACCAGATAAGGCCATTGAT GTTATGGACGAAGCGGCGGCTACTAAGCGGCTGGACAATCCAGTAGCCAATAGTGGTCGCCGGAAAAAATTCCAAATCGA ACAGGAATTGAAGCGCCTCAACCAAGAAAAAGAATACCATGTCCGTAACCAGGCCTTTCAAAAGGCGGCCGCGGTCCATG CCCAACAAGCGAACCTAGTCAGAGAACTTAGTCGCTTGGAAACAGACGAAGGCGACCAGGACAATCAAGACAGCTACGAC TTAAGTTTGACCAGTCAAGACGTGCAAAACTTGATTCATTCTTGGACCGGTATTCCAGTTCAAGAATTGAGTCAAAGTGA TAATGAACGCTTGATCCACTTAGAAGACCGCCTCCATGACCGGGTCAAGGGACAAGATGAAGCGGTCAATGCGGTAGCCC GGGCCATTAAACGGTCGCGCAGTGGTTTGGGACAAAGAAACCGGCCCATCGGTTCCTTTATGTTCCTAGGGCCAACGGGA GTTGGGAAAACCGAATTGGCCAAGACCTTTGCCGAAACCCTTTTTGGTTCGGAAGAGGCTCTGATTCGTTTAGATATGTC TGAATACATGGAGAAATATTCTTCCAGCCGGATGATAGGGTCTGCACCCGGTTATGTTGGCTATGAAGAAGGGGGTCAAC TGACCGAGAAAATTCGTCAACACCCCTATTCCATTGTCCTCTTCGATGAAATTGAAAAGGCCCATCCTGATGTCTTTGAC CTCTTACTTCAAGTCCTTGATGACGGTTATATCACCGATAGTAAGGGTCGGATGGTGGACTTTAGAAATACGGTAGTCAT CATGACCTCTAATATTGGGGCCACTGAATTACGGGATGAAAAACTGGTCGGCTTTGGCCAAGATAACCAACAAAAAGACT ATCAAAGCATGAAGAAACGGATAATGGAAGCCTTGAAGAAGACCTTTAGACCGGAGTTTCTTAACCGGGTGGATGAAGTG ATTGTCTTCCACGCCCTAAGTCAAGACAACTTGAAGGATATTGTCCGCAAATTTACCGACCAAATTAGCCAACAAGTGGA AGAACAAGGCTTGACCTTGCGCTTTACCAATGGGGCCATTAAGCAATTGGCTAAGGACGGTTATGACCCAGAAATGGGTG CCCGGCCCGTTCGCCGCCTCATCCAACGGCAAATTGAAGATGCTCTGAGTGACCTCTTGATTGAAGGAAAGGTCCAAGCT GGGGACAGCCTTCAAGTAGGCAGCCGCCAAGGCACTTTCTACATCCGTACTAAACATGGCGACGGCAGTGAAAGCCAGGC TGATCTGGAAAAAGTGGAGGAAAGCCTGTCCCTAGGATAG Protein sequence : MKDIYTEKAKTAIGFAKEEAEYFRHPAIGSEHMLLGLYRESEGVAHAVLSDYLPSYESLREEIEFVTGYGTSDSAKSQED YVQFSPRMQDVLNQAKDLAKSMQASLIGTEHLLLALINEETLANRLLKNLDIDVNRLRSDVYQMLGQKEPVRNRTKKPLG KQSKSKTPTLDSIAKDLTQAAKDGKLDPVIGRQQEMRRLMQVLSRRTKNNPVLVGEPGVGKTAIVEALAIQMSQQQVPEN MLDKRLMVLDIGSLVAGTKYRGEFEDRMKHLIEEIEDQGNIILFIDEIHTIIGAGGAEGAIDASNLLKPALSRGQVQLIG ATTLNEYQKYIEKDAALERRFAKILVEEPTLEETEEILKGIRPAYEKHHQVAIPDESITTCVRLSSRYLSDRFLPDKAID VMDEAAATKRLDNPVANSGRRKKFQIEQELKRLNQEKEYHVRNQAFQKAAAVHAQQANLVRELSRLETDEGDQDNQDSYD LSLTSQDVQNLIHSWTGIPVQELSQSDNERLIHLEDRLHDRVKGQDEAVNAVARAIKRSRSGLGQRNRPIGSFMFLGPTG VGKTELAKTFAETLFGSEEALIRLDMSEYMEKYSSSRMIGSAPGYVGYEEGGQLTEKIRQHPYSIVLFDEIEKAHPDVFD LLLQVLDDGYITDSKGRMVDFRNTVVIMTSNIGATELRDEKLVGFGQDNQQKDYQSMKKRIMEALKKTFRPEFLNRVDEV IVFHALSQDNLKDIVRKFTDQISQQVEEQGLTLRFTNGAIKQLAKDGYDPEMGARPVRRLIQRQIEDALSDLLIEGKVQA GDSLQVGSRQGTFYIRTKHGDGSESQADLEKVEESLSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-170 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC_1 | YP_004320779.1 | negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 0.0 | 52 |
| clpC_1 | YP_004320779.1 | negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 8e-133 | 50 |
