Gene Information

Name : HMPREF9243_0003 (HMPREF9243_0003)
Accession : YP_004320435.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : transposase, IS116/IS110/IS902 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 3311 - 4531 bp
Length : 1221 bp
Strand : -
Note : identified by match to protein family HMM PF02371

DNA sequence :
ATGACTAAGTATTTATATGCATTTGATGTTTCCAAAGGAAAAGCGACACAAGTTCTGTATAAAAATAATAGATGTATTGA
GGAAAGCCTTTTGGAATTCACTCGTAAGGGATTTGAAGAACTGTTACAGAATATCCAACAGATCCCTGGGGAAGTGACTC
TTGCTTTTGAAACGACAGGTATCTATTCAAAGCCACTTGAACGATTTTGTCACAAAAATCATTTAACTTACCACAGTTTG
AATCCTTTAGAAGTGTACAATCGAACTAATGGTTTGACATTAAGAAGAAATAAAACAGACCAAGCAGATGCTCATAAATT
GGCACAAATCATGTCAAATTTTAACTTTCAACCTTCGGTAAGGAAAGAGCTTCGCTATGAAGAAATGAAGCGCATGAATG
CTTATTATTTAGAACTACAAGAAGGTATCGACAGACTCTATGTTAAGTTTTTAGAAGGTATCTATCTTTGCTTTCCTGGT
ATCGAAAAAGTTTTCTCTAAATTAAAAAATGAATTTGCTTTAACTATTATTGAAAAATACCCACATCCCGACTATGTGCT
AGAAACCTCTCGAACAGTCATCAAAAATATATTGAAAAAGTCAACATTAAAAAATATCTCTAAGCAAAGAGCTTTTCAAA
AAGCTGATCAAATCATTGAGTGTGCAGCTTCTTCCTATCCTTCTGTCCATAAGGACAGTTTTTATTGTCAGGTGCTCAGT
TTTTATGCCGCACATCTAAAAAATTTAATTAATCAAAAAGAACTTATTCAAGATAAGATGATTGCTTTGGGACGTCAGTT
TTCTGAATTTATAATTTATGCCAGTGTACCAGGGATTGGGCAACTGTCGGCTTGTCAGTTAATTGCAGAATTAGGTGATT
TATCCCGATTCGAGAACCACAAACAATTAAATGCCTATGTCGGAATTGATATTAGACGCTATCAATCAGGTAAATTTATA
GGCCGAGACCATATCAACAAACGTGGAAATAAAAAAGCTAGAAAAATACTTTATATCATTATTACCAATATGATTCGCGC
CCAGAGACATGCGCCAAATCATATCGTTGATTATTACTATACAAAAAAACAGCCACCCTTTAATAAATGCCATAAGGTAG
CTGTTATAGCGTGTATGAATAAGCTGCTTAAATGCCTATACGCGCTATTCAATCATCATACGAAGTATGATTATGAATTA
AATGCCTCTCACCGCAACTAA

Protein sequence :
MTKYLYAFDVSKGKATQVLYKNNRCIEESLLEFTRKGFEELLQNIQQIPGEVTLAFETTGIYSKPLERFCHKNHLTYHSL
NPLEVYNRTNGLTLRRNKTDQADAHKLAQIMSNFNFQPSVRKELRYEEMKRMNAYYLELQEGIDRLYVKFLEGIYLCFPG
IEKVFSKLKNEFALTIIEKYPHPDYVLETSRTVIKNILKKSTLKNISKQRAFQKADQIIECAASSYPSVHKDSFYCQVLS
FYAAHLKNLINQKELIQDKMIALGRQFSEFIIYASVPGIGQLSACQLIAELGDLSRFENHKQLNAYVGIDIRRYQSGKFI
GRDHINKRGNKKARKILYIIITNMIRAQRHAPNHIVDYYYTKKQPPFNKCHKVAVIACMNKLLKCLYALFNHHTKYDYEL
NASHRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0051 NP_763606.1 hypothetical protein Not tested SCCpbp4 Protein 7e-55 44