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Name : dnaB (HMPREF9243_0026) Accession : YP_004320456.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.4.12 Position : 30849 - 32222 bp Length : 1374 bp Strand : + Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGGCAGATGAACATTTAATCGAGCGCATTCCGCCTCAAAGTATTGAAGCGGAACAGGCAGTCTTAGGGTCGGTGTTTTT AGATCCTGAGGTTTTTCCTGCTGTCAATGAATACGTTGAACCCCAAGACTTCTATAAACGGGCCCACCAACTCATCTTTG AAAGCATGCGGCAATTGAACGAAGACCAAGAGGGGATTGACGTGATTACCGTTCAGGACAGCCTCTTAAGTCAAGGCATG TTGGATAATGTGGGCGGGGCAGACTACCTCTTCGAACTGGCGACCAATACCCCAACAGCAGCCCACGCCGAATACTATGC CCAGATCGTGGAACAGAAATCGATCTTACGAAAATTAATCCATGCTTCCAATGAGATTTCTAGGGAGAGTTACGAAGAAC AGTCCGATGTCATGGATATCTTGGACCATGCGGAACGGGCAATTCTAGATGTGTCCCAGAGCCGTAACCGGAGTGGCTTT GTCCATATTGGTAAAGTTTTGAACCATTCACTGGATACCATTGAAGAATTATCCAAGAATAAAAAATCGATTACCGGTCT AGCGACAGGCTATCCGGATTTAGACCGGATGACAGCGGGCTTACATGAAGACGAACTGATTATTATCGCCGCCCGTCCCG GGGTAGGGAAGACCGCCTTTGCCTTAAATATCGCCCAAAATGTGGCTACCAAGCAGGATGCAGTTGTGGCGCTATTCTCC CTTGAAATGGGGGCAGAATCCTTGGTTAACCGGATGCTGTGCGCTGAAGGGAGTATTGATGCTGGTCGCTTGCGGACGGG GCAACTGCTGGAACAAGAGTGGTCAGACTTAATTGTGGCTATGGGAGCCCTGGGGTCTTCGGAAATTTATATTGATGATA CCCCCGGTAACCGGATGGCAGAAATCCGGGCCAAGTCCCGTCGCCTTTATCAAGATAAGGGCAGGTTGGACCTGATTGTG ATTGACTACTTGCAGTTGATTGAAGGAAGCCGGCGGAGCGAGAACCGCCAACAAGAGGTTTCTGAAATTTCCCGGCAATT AAAGAAATTAGCCAAAGAACTGTCTTGTCCCGTGGTTGCCTTATCCCAATTATCGCGGTCCGTAGAACAAAGACAGGATA AACGCCCAGTCCTCAGTGATATCCGGGAATCGGGATCCATTGAACAAGACGCCGATATCGTGGCCTTCCTCTACCGCGAA GACTATTATGAACGCGAAGACGGGGAAGAGGCCGAAGACCATGAAGAGAATAATATTATTGAAGTCATCATTGAAAAGAA CCGGGCCGGCGCTCGGGGAACCGTCAAGTTGATCTTTACCAAAGAGTTCAATAAATTCTCTTCCGTCAGCTTTAGGGATG AAGAAATGGTCTAA Protein sequence : MADEHLIERIPPQSIEAEQAVLGSVFLDPEVFPAVNEYVEPQDFYKRAHQLIFESMRQLNEDQEGIDVITVQDSLLSQGM LDNVGGADYLFELATNTPTAAHAEYYAQIVEQKSILRKLIHASNEISRESYEEQSDVMDILDHAERAILDVSQSRNRSGF VHIGKVLNHSLDTIEELSKNKKSITGLATGYPDLDRMTAGLHEDELIIIAARPGVGKTAFALNIAQNVATKQDAVVALFS LEMGAESLVNRMLCAEGSIDAGRLRTGQLLEQEWSDLIVAMGALGSSEIYIDDTPGNRMAEIRAKSRRLYQDKGRLDLIV IDYLQLIEGSRRSENRQQEVSEISRQLKKLAKELSCPVVALSQLSRSVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRE DYYEREDGEEAEDHEENNIIEVIIEKNRAGARGTVKLIFTKEFNKFSSVSFRDEEMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-70 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-60 | 41 |
