Gene Information

Name : HMPREF9243_1955 (HMPREF9243_1955)
Accession : YP_004322070.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : integrase core domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1971735 - 1972625 bp
Length : 891 bp
Strand : -
Note : identified by match to protein family HMM PF00665; overlaps another CDS with the same product name

DNA sequence :
GTGACCGAAATCACACGTCTCCATGATGAAAAATATGCTTTAAAAGATATTCTTAGCGTTTTAAAGTTTCCTAAATCGAC
CTACTTTTATTGGAAAAATAAAGATGAGGAAATTGATAAGGATGCCGATTTAAAAGAGGAAATGAAAGACATCAGAGAAA
CCCATAAGGATTATGGTTATCGAAGAATGCGAGCTGAACTGCTTTCCCGTGGTTATAAGGTCAGTAAAAACAAAGTTCAA
CGCCTAATGAAAATTATGGGGATACAGGTCACTAGCTATACTAGAAAGACAAGAAAATATAATTCCTACAAAGGAACGAT
TGGAGAGATAGCGCCAAATCGTATCAACCGGCGGTTTGATTCGACCATTCCTTATCAAAAAATAACAACAGACACAACAG
AATTTAAATACTACTATGCCGATGATTCTGGGAATTATCAAACTGGAAAACTCTATTTAGATCCTTACATGGATCTATTT
AATCGAGAAATTATTTCTTTTAAGATAACACATCAGCCTAATGGACAAAGCATGTTGGAGGGGCTACAAGCTGCCATTGA
AGCAAGTAAATTATGTCCATACAGAAGAACCTTTCATTCTGATCAGGGCTGGGCCTATCAAATGAAAAGTTACACCCGGC
TCTTGAAGGATCACCGAATTTTTCAAAGTATGTCTCGTAAAGGAAATTGCTTAGATAATTCGCCAATGGAGAATTTCTTT
AGTCTACTAAAACAAGAAGTCTACTATGGTCGGACTTATCATTCCTTTGAAGAATTAGCACAAGCGATTGAAGATTTTAT
AATCTATTACAATGGTGAAAGAATCAAAGAAAAATTAGATTTTAGGAGTCCTATAGAATTTCGTCTTCATCACGCTTCTT
TCGCCGCTTAA

Protein sequence :
MTEITRLHDEKYALKDILSVLKFPKSTYFYWKNKDEEIDKDADLKEEMKDIRETHKDYGYRRMRAELLSRGYKVSKNKVQ
RLMKIMGIQVTSYTRKTRKYNSYKGTIGEIAPNRINRRFDSTIPYQKITTDTTEFKYYYADDSGNYQTGKLYLDPYMDLF
NREIISFKITHQPNGQSMLEGLQAAIEASKLCPYRRTFHSDQGWAYQMKSYTRLLKDHRIFQSMSRKGNCLDNSPMENFF
SLLKQEVYYGRTYHSFEELAQAIEDFIIYYNGERIKEKLDFRSPIEFRLHHASFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 8e-48 46
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 8e-48 45
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 2e-45 43