Gene Information

Name : HMPREF9243_1917 (HMPREF9243_1917)
Accession : YP_004322035.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1930593 - 1931342 bp
Length : 750 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAAGGATACTGACAGCTAAGGATATTAATAAGACTTTCGGAAGCGGTGAAAATAAGGTCCAGGCAGTCAATCAAGT
CAGCTTAACGATTCAACAAGGCGAATTTGTCTCCATCATGGGCCCTTCAGGCTGCGGTAAATCCAGCCTCTTGCATTGCC
TGTCCGCTATCGAGACGATCGATTCCGGCTCTTTAAACCTTCTGGATCAGGAGATTAATCAGTTAAGTGACGAAGAATTA
TCTGATTTTCGCAGGCAAAATTTAGGTTTTATCTTCCAAAGGCCCACCCTAGTGAAGAGCCTGGACCTTTTGGATAATAT
TATCTTCCCCAGTTTTGAGGATTTCAGCGGGGATAAAGCAGACCTCATTCAAGAGGCCAAGGCTTTAATGCGAAGACTTG
GCCTAGAAGGCTTAGAAAACCGTAAAAGTCACCAAGTTTCTGGTGGCCAACTACAAAGAATCACCATATGTCGCGCACTG
CTCCATCGTCCAGCTATTCTTTTTGCTGATGAGCCCACAGGCGCCTTAAATTCCCAGACCAGCGATGAAATATTGGACTT
ATTTAAGCAAGTCAATTTAGAACAGATGACAATTCTTATGGTCACTCATGATGCCAAGGTGGCCTCCCAAAGTCGTCGGG
TCATTTTTATGAAGGACGGTTGCTTGGAAAAAGAATTAACTTTTCGTCAAGAAAGCTATGATGACCGCCTAGAACAAATT
AGACAGGTCATGACTGAGCTGGGGGTATAA

Protein sequence : 
MKRILTAKDINKTFGSGENKVQAVNQVSLTIQQGEFVSIMGPSGCGKSSLLHCLSAIETIDSGSLNLLDQEINQLSDEEL
SDFRRQNLGFIFQRPTLVKSLDLLDNIIFPSFEDFSGDKADLIQEAKALMRRLGLEGLENRKSHQVSGGQLQRITICRAL
LHRPAILFADEPTGALNSQTSDEILDLFKQVNLEQMTILMVTHDAKVASQSRRVIFMKDGCLEKELTFRQESYDDRLEQI
RQVMTELGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_1917 YP_004322035.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-35 42
HMPREF9243_1917 YP_004322035.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-36 41