Gene Information

Name : HMPREF9243_1911 (HMPREF9243_1911)
Accession : YP_004322029.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1923818 - 1924498 bp
Length : 681 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAAATACTTCGCGTTGACAGTTTGACTAAAATTTATGGCCAAGGAGAGAAGCAAGTCCGGGCTGTCGATGGGGTGAA
TCTGTCCGTCAACCGGGGAGAGCTTATTGCTATTGTCGGGCCGAGTGGGTCGGGTAAGTCTACCCTACTCCATATGCTTG
GTGGAGTGGACCGGCCCAATGAGGGGAAGATACTCATTGAAGGGTCCGATATTGACAGCTATTCGTCTAAGGAAATGGCC
TTGTTCCGGCGGCGCAAGGTGGGGCTGATCTACCAGTTCTACAACCTCATCCCCAATCTGACCGTGTCACATAATATTAA
ACTGCCCTTGAAGTTAGATGGGCGTCAGGTGGATGACGCCTTCTTTATTGACTTAGTGACCAAGCTGGGCTTATCCAATA
AGTTGCAGGCCTTTCCGAGTGAGCTATCGGGAGGTCAGGAGCAGCGTGTGGCCGTGGCCCGTAGCCTGATCTACCGGCCT
TCGATCATCTTAGCGGATGAACCGACCGGAAACCTGGACCGGAAGAACTCTCAGGAGATCATTGACCTCTTGAAGTACTT
CAACCAGACCCTCAAGCAGACTATCCTGATTATCACCCACGATGAAAACCTGGCCCTTCAGACCCAGCGGATTATCACTA
TGGTCGACGGGGCTATCGTAGGAGATGAGCCCAATGAATAA

Protein sequence : 
MEILRVDSLTKIYGQGEKQVRAVDGVNLSVNRGELIAIVGPSGSGKSTLLHMLGGVDRPNEGKILIEGSDIDSYSSKEMA
LFRRRKVGLIYQFYNLIPNLTVSHNIKLPLKLDGRQVDDAFFIDLVTKLGLSNKLQAFPSELSGGQEQRVAVARSLIYRP
SIILADEPTGNLDRKNSQEIIDLLKYFNQTLKQTILIITHDENLALQTQRIITMVDGAIVGDEPNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-25 41
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9243_1911 YP_004322029.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-48 49
HMPREF9243_1911 YP_004322029.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-52 48
HMPREF9243_1911 YP_004322029.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-34 42