Gene Information

Name : HMPREF9243_1832 (HMPREF9243_1832)
Accession : YP_004321962.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 1854900 - 1856225 bp
Length : 1326 bp
Strand : +
Note : identified by match to protein family HMM PF01610

DNA sequence :
ATGACTCAATCTAATTGTATACAAAATCTCTTTAATATAAAAGATGAAAATATTGAAATTGAAGATAAAGTAGTGGAGGA
AAAGAAAAATAATATCATTCATAAGGTTATTTTTGGAACCTTAACTAACCATCCTTCTCACTGTTCCCATTGCGGACATA
TCAACGAATCACAAGCTGATATCGTTAAAAATGGATTTTATTCAAGCGATATCTTACTAACGACCATTAATGGAGGTCAA
CCCGTTACTTTGCGTCTTAAAAAGCAACGTTTCTTTTGTAAGCACTGCCAAAGGACTTTTAATACTGAAACCCCCATAGT
GGCAGCTAATTGCTATATTTCTAAAGCGCTAAAAACTGCGATTACTTTTGCTCTTAGTGAAACGATAGCGATGACTCTTA
TCGGTAAACAACACAATGTTTCTGTATCGACGGTGATTCGTCTTCTAGAAGAAAGAGGGAAAGCATTACTACCTAAATTT
AATTATTTGCCCCAGTGCCTTTCTTTTGATGAATTTAAATCAGTGAAAAATGTTAGTGGCGCGATGAGCTTTATTTTTAT
TGATCCCCTAAACCATCGGTTAATTGATATTGTTGAAAATCGACAAAAGAACGAATTAATCCACTACTTTATGCGTTTTT
CTTACAAAAGTCGACAAGCTGTCAAAATAGTTACGATTGATATGTATAGCCCTTATATTGAAGTTATCCGCGCTTGTTTC
CCTAATGCAAAGATACTATTTGATCGTTTTCACGTTATTCAACATCTTAATCTGGCAATCAACTCCGTACGTATTCAACT
GATGAATCATATTCGCTATCAATCACCACGTGATTATCGCAAATTAAAACAGTTATGGAAGTTACCTTTAAAAAATGAAT
GGGAACTTGACTATAAAAACTTATATACACATCGACTTTTTGACGGTCTCGTTTCAGAACAGATGATTGTCGATTACCTC
ATCAATTTATCTCCCGAATTGTCACGTACCTATACCTATGTTAATCGCCTAAAATACAGTATTTATACCCATGACATTCA
GTCATTTAAAGACTTACTCATTGAAGTCAAGAAGTACACTTTTCCACGTAGAGTACGAACTATTTTTCAAACCTTAGAAA
GATATCAAGAAGGTATTTGTGAAGCTTTAACGTATACTTTGTCTAACGGTCCAATAGAAGGAATGAACAATAAAACGAAA
CTGATCAAGCGCACAGGTTATGGCTACCATCGTTTTGATCATTTAAGAATACGTATAATAATGGCTTCTCGCTTGGTATG
TAATGATTTCCAACCTCGTTCACTCACTTTTTCAGAAGCAGCATAA

Protein sequence :
MTQSNCIQNLFNIKDENIEIEDKVVEEKKNNIIHKVIFGTLTNHPSHCSHCGHINESQADIVKNGFYSSDILLTTINGGQ
PVTLRLKKQRFFCKHCQRTFNTETPIVAANCYISKALKTAITFALSETIAMTLIGKQHNVSVSTVIRLLEERGKALLPKF
NYLPQCLSFDEFKSVKNVSGAMSFIFIDPLNHRLIDIVENRQKNELIHYFMRFSYKSRQAVKIVTIDMYSPYIEVIRACF
PNAKILFDRFHVIQHLNLAINSVRIQLMNHIRYQSPRDYRKLKQLWKLPLKNEWELDYKNLYTHRLFDGLVSEQMIVDYL
INLSPELSRTYTYVNRLKYSIYTHDIQSFKDLLIEVKKYTFPRRVRTIFQTLERYQEGICEALTYTLSNGPIEGMNNKTK
LIKRTGYGYHRFDHLRIRIIMASRLVCNDFQPRSLTFSEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_251995.1 transposase for ISSha1 Not tested SCCmec Protein 5e-63 42
tnp YP_251945.1 transposase for ISSha1 Not tested SCCmec Protein 3e-63 42