|
Name : secA (HMPREF9243_1791) Accession : YP_004321924.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Unknown Product : Preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 1807644 - 1810016 bp Length : 2373 bp Strand : - Note : identified by match to protein family HMM PF00271; match to protein family HMM PF01043; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963 DNA sequence : ATGGCCAACATTTTAAGAAAAATGTTTGATAACGATAAAAGAGAATTAAAACGTTTTAATAAACAAGCAAAAAAAGTGGA AGCACTTGCTGATAAATACAGTGAGTATTCTGATGAACAATTACGGGCAAAAACAACTTCTTTTCGTGAGCGTCTCGCTT ATGGGGAGAGCTTAGAAGACATCTTAGTCGAAGCCTTTGCCACTGTTCGGGAAGCCGCTAAACGGGTTTTAGGTTTATAT CCCTACCATGTCCAAATCGTGGGGGGCTTAGCCCTGCATTATGGGAATATTGCTGAGATGAAAACCGGGGAAGGGAAGAC TTTGACGGAGACCATGCCAGTTTACCTCAATGCCTTAGAAGGTAAAGGGGTTCATGTGGTAACAGTCAACGACTACCTAG CCCGTCGTGACTCGGTTGATATGGGAGAAGTCTATCGATTCCTAGGCCTCACAGTTGGTTTAAATACTAATGACCTAACC GCCGAAGAAAAACGCGCGGCCTACCACTGTGATGTGACTTATTCCACCAACAACGAATTAGGATTTGACTATTTACGTGA CAACATGGTCGTTTATAAAGAGCAAATGGTTCAACGTCCCTTGCATTATGCCATTGTCGATGAGGTAGACTCCATTCTAA TTGATGAGGCCCGGACACCTTTGATCATTTCTGGACAGGCCGAACAGTCAACTGCACTTTACCAACGGGCTGATTATTTT GTAAAATCCTTGAAAGAGGAAGAAGACTATGTCATTGATATTGAATCAAAAACCATTAGTCTGACCGAACAAGGTGTCGA TAAGGCGGAATCTGTCTTCCATTTAGATAATCTTTATGATGTGGAAAACGGTCCGCTTATCCACCACATTGATACCGCCT TACGGGCTAACTACATTATGATCCGTGATATTGATTACGTGGTTCAAGATGATGAAGTTAAGATTGTGGATGGTTTTACC GGGCGGATTATGGAAGGACGGCACTACTCAGATGGCCTCCACCAAGGGATTGAAGCCAAGGAAAATGTTCCCATTCAAAA TGAATCCAAAACCATGGCCACCATTACCTTCCAAAATTATTTCCGTATGTACGACAAATTAGCTGGGATGACCGGGACAG CTAAAACCGAAGAACAAGAATTTCGTGAAATCTATGATATGGATGTTATTCAAATTCCTACCAACCGTCCGGTGCAAAGA GAAGATGCCTTGGATAAGATTTACCCTAACTTGATGACCAAGTTCCGTGCGGTAGCCGATGAAATTGAGACTCGCCACAA AAAGGGTCAACCTGTTTTGGTAGGGACTGTGGCAGTGGAAACCTCGGAATTACTTTCACGGATGCTCAGTGAACGGAACA TTCCACATAATGTCTTAAACGCTAAAAACCATGCCCGTGAAGCTGAAATCATTGCCCAAGCAGGACAAGAAGGCGCCGTA ACTATTGCCACCAATATGGCTGGTCGTGGGACCGACATTAAATTAGGACCTGGCGTTAAAGACCTGGGCGGTCTAGCGGT TATTGGGACGGAACGCCATGAATCACGCCGGATTGATGATCAGTTGCGGGGCCGTTCTGGCCGGCAAGGAGACCCAGGTT TCTCTCGCTTCTACTTATCTTTAGAAGATGACTTGATGCGTCGCTTTGGTTCTGACCGGGTGAAAGCGATTTGGGAAAAC CTCCACTTAGAGGATGATGATGTCTCAATTGAAAATCCCATGCTGACTCGCCAAGTGGAATCTGCTCAAAAACGGGTAGA AGGTAATAACTACGATACCCGTAAGAGTGTTTTAGAATACGACGAAGTCATGCGTGAACAACGGGAAATCATCTATAGCC AACGTCAACAAATTATCGATGAGAAAGAATCCCTCAATGATATCATGTGGGCAATGATTGAACGTACCGTTGAGCGAATG GTAGAACAGTACACTGCTGGAACGGAAAAAGAGTGGAACTTAGAAGCCCTCTATGACCAAGTGTCTACTGAGATCTTACA TTCTGACGCTATCCAATCCAGTGATTTACAAGGTAAGTCTCAAGACGAGCTCAAGCAATTCATTACCGATAAAGCTCGCC AACGCTTCCAAGAAAAGTTAGAGAATATTGCTAACCCTGATCTGATCTTGGAATTTGAAAAGGTGGTTATTCTGCGGGCA GTTGACACCCGTTGGACCGACCATATTGATGCCATGGATCAATTACGTCAAGGGGTAGGGCTAAGAGCCTATGCGCAAAA TAACCCACTAGTGGAATACCAAACTGAAGGTTATGAACGCTTCAATGATATGATTTCTGGCATTGAATACGATGCCAGTC GGATCTTTATGAATTCTGAAATCCGTCAAAACCTACAAAGACAACAAGTTTAA Protein sequence : MANILRKMFDNDKRELKRFNKQAKKVEALADKYSEYSDEQLRAKTTSFRERLAYGESLEDILVEAFATVREAAKRVLGLY PYHVQIVGGLALHYGNIAEMKTGEGKTLTETMPVYLNALEGKGVHVVTVNDYLARRDSVDMGEVYRFLGLTVGLNTNDLT AEEKRAAYHCDVTYSTNNELGFDYLRDNMVVYKEQMVQRPLHYAIVDEVDSILIDEARTPLIISGQAEQSTALYQRADYF VKSLKEEEDYVIDIESKTISLTEQGVDKAESVFHLDNLYDVENGPLIHHIDTALRANYIMIRDIDYVVQDDEVKIVDGFT GRIMEGRHYSDGLHQGIEAKENVPIQNESKTMATITFQNYFRMYDKLAGMTGTAKTEEQEFREIYDMDVIQIPTNRPVQR EDALDKIYPNLMTKFRAVADEIETRHKKGQPVLVGTVAVETSELLSRMLSERNIPHNVLNAKNHAREAEIIAQAGQEGAV TIATNMAGRGTDIKLGPGVKDLGGLAVIGTERHESRRIDDQLRGRSGRQGDPGFSRFYLSLEDDLMRRFGSDRVKAIWEN LHLEDDDVSIENPMLTRQVESAQKRVEGNNYDTRKSVLEYDEVMREQREIIYSQRQQIIDEKESLNDIMWAMIERTVERM VEQYTAGTEKEWNLEALYDQVSTEILHSDAIQSSDLQGKSQDELKQFITDKARQRFQEKLENIANPDLILEFEKVVILRA VDTRWTDHIDAMDQLRQGVGLRAYAQNNPLVEYQTEGYERFNDMISGIEYDASRIFMNSEIRQNLQRQQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 4e-148 | 43 |
