Gene Information

Name : smpB (HMPREF9243_1284)
Accession : YP_004321501.1
Strain : Aerococcus urinae ACS-120-V-Col10a
Genome accession: NC_015278
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1313049 - 1313513 bp
Length : 465 bp
Strand : -
Note : identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086

DNA sequence :
GTGACAAAGAAGAAGCAAGACAATGTGGTAGCGACAAATCGCAAAGCGAATCATGATTATATCATTGAAGATACTATTGA
AGCTGGTCTTGTCTTAACTGGAACAGAAATTAAATCGATTCGTAAGGGGAAGGTAAACTTAAAGGATTCCTTTGCCCGGG
TAGAAAATGGTCAGGTATGGGTCTATGGGATGCATGTGAGTCCCTTTGAACAAGGCAACCGTTTTAACCCGGATCCTATG
CGGCCAAGAAAATTATTATTAAAGAAGCGTGAAATCAATCGCCTAGCTAAGCATGTTAGCCAAGAAGGATATGCGATTAT
CCCACTACGGATGTATATTAAAAGAGGCTTTGCTAAATTACTCATCGGCATTGGTAAAGGAAAGAAAAAATACGATAAGC
GCCAAGCCTTAAAAGAAAAAGATATGAAGCGTGACATTAAACGGGCAATGAAAGAAAAATATTAA

Protein sequence :
MTKKKQDNVVATNRKANHDYIIEDTIEAGLVLTGTEIKSIRKGKVNLKDSFARVENGQVWVYGMHVSPFEQGNRFNPDPM
RPRKLLLKKREINRLAKHVSQEGYAIIPLRMYIKRGFAKLLIGIGKGKKKYDKRQALKEKDMKRDIKRAMKEKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-38 63
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 9e-25 44
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-20 42