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Name : HMPREF9243_1075 (HMPREF9243_1075) Accession : YP_004321338.1 Strain : Aerococcus urinae ACS-120-V-Col10a Genome accession: NC_015278 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : 3.5.1.18 Position : 1101564 - 1102724 bp Length : 1161 bp Strand : + Note : identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910 DNA sequence : ATGCTGTTTACGGATGAGGAAAAATTACAGATTTTACGCGATGTATTAGCAATTGAAAGTGAAAATGATCGAGAGGCAGA GGTCGCTGAATATTTTAGCCGCTTACTGGCTAAGTATGGTATTGAGAGCGAAATTATTGAATACCAAGCTGGGCGCTCTT CGCTTATTGCCAATATCCATGGTAGTGAAGGTGGAGAAGGAAAGGTCTTAGTCTATTCAGGGCATTTCGATGTCGTATCT GCAGGCGACCCTAGTGATTGGACCTATCCACCTTTTGCTGGAGAGATTCATGATGGAAAAATCTATGGCAGGGGGACTTC AGATATGAAGTCTGGTTTGGTTGACTTGGTTTTGGCTGCCATTGAATTAAAGGAAGCCGGCGCCAATTTTAAAGGTTGTC TACGCTTAGCCCTGACGGTTGGTGAAGAGATTGGCATGTATGGGTCCAAACAATTAGTCGAAGCAGGTTATTTAGATGAT GCCGATGGCTTTTTAATTGCAGAACCATCAGGGAGTGAGTCAGTGATATATGCCCATAAAGGATCTATCCAATATGAAAT TATTGCCCGTGGGAAAACTGTTCACTCTTCCATGCCAGAAGTGGGTATTGATGCCTTGCAGTTAATGGTTGATTATATCA ACTTAAGTAATCAACGTTTTGATGAAAGCTTTAATACTGAATCCGCTTATAATGCTGACCTAGGGAAGACCCTAAATGTC AATACAGTGATCGAGGGGGGGACTCAGATCAATAGTGTGGCTGGTTTAGTAAAAATGAAAGCCAATACCCGGACAGTTCC TGAAGCGGACAATGATTTAGTTTTATCGATAATTAATGACTGTATCGAAGAGTTAAATGCTAAGAGTGAGGGGTATTTAG AATTAAATCTTCTTCAAAACAATCCACCAGCAACCTCAACAGAAGATAATGATTTAATTAAAGCCATCCAATCCAGTGTC AGTCATGAATTAGAGCTGACCGTTACCGGTGGAGCAACAGATGCTTCTAATTTCGGTCAAATTGGTGAAGACTATGATTT AGCGGTTTATGGGCCAGGAGAACCCTCAGTCGCTCACCAAGAAAATGAATATGTCTCCTTAGATAAATTTTTAGCTTTCG TCGATATCTATAAAGAAACAGCCCTAAACTACCTTAAATAA Protein sequence : MLFTDEEKLQILRDVLAIESENDREAEVAEYFSRLLAKYGIESEIIEYQAGRSSLIANIHGSEGGEGKVLVYSGHFDVVS AGDPSDWTYPPFAGEIHDGKIYGRGTSDMKSGLVDLVLAAIELKEAGANFKGCLRLALTVGEEIGMYGSKQLVEAGYLDD ADGFLIAEPSGSESVIYAHKGSIQYEIIARGKTVHSSMPEVGIDALQLMVDYINLSNQRFDESFNTESAYNADLGKTLNV NTVIEGGTQINSVAGLVKMKANTRTVPEADNDLVLSIINDCIEELNAKSEGYLELNLLQNNPPATSTEDNDLIKAIQSSV SHELELTVTGGATDASNFGQIGEDYDLAVYGPGEPSVAHQENEYVSLDKFLAFVDIYKETALNYLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-70 | 42 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 1e-70 | 42 |
