Gene Information

Name : Sph21_4886 (Sph21_4886)
Accession : YP_004320063.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 5804809 - 5806341 bp
Length : 1533 bp
Strand : +
Note : KEGG: cpi:Cpin_5844 catalase; PFAM: catalase-related subgroup; catalase-related immune responsive

DNA sequence :
ATGGAAGATCTATTCAAACTCAGGTCCGCATCCGGGATTCCTTACGTATATGAACAAGATTCTCGCAGTGTAGGCCCCCG
TGGGCCACTGCTGTTGGAAGACTATATATTGCATGAAAAAATGGCTCACTTTAACAGAGAGCGGATCCCGGAACGTGTGG
TTCATGCAAAAGGTTCTGCCGCCTTCGGAACCTTTACAGTTACCAAAGATATTACTCGATATACACGGGCTAAACTTTTT
AATCAGCTAGGTAAACAGACGAAAATAATCTTGCGCATGTCTACCATTGCGGGAGAAAAAGGCAGTGCCGACTCAGAAAG
AGATCCGAGAGGATTTGCTGTCAAATTCTATACGGAAGATGGTAATTGGGATTTGGTAGGCAATAATACACCCGTTTTTT
TCATAAAAGATCCTAAAAAATTTTCAGACTTTATCCATAGCCAAAAACGCGACCCCTATCACAACCTACGCAGCGCTACC
CGCATATGGGACTTTTTCAGCTTTAATCCCGAAAGTTTGCATCAAGTACTCATTTTAATGAGCAATAGAGGAACCCCCTA
TGGTTTACGGCACATGCATGGTTATGGCAGTCATGCCTTTAGCATGATCAACGCAAAAAATGAACGTGTATACGTCAAGT
TTCACTTTCGTACACAACAGGGCATCAAGAATTTCAGCCATGACGAAGCCCTACAAATGCGCAGTGCAGATCCTGATTTT
TCTCAACGGGATTTATTCGAGGCAATCGAAAGCGGCAATTTTCCCAAATGGACCTTATTTATTCAGGTGATGACGACCGA
TCAATGCAGCAAATTAGCTTTTAACCCGTTTGATATCACCAAAACCTGGAGCCAAAAAGAATTCCCTCTGATAGAAGTAG
GGGTATTGGAACTGAACAAAAATCCAAGTAACTATTTTGCCCAGGTCGAGCAGCTCGCTTTCGCACCGGCCCATGTAATA
GATGGTATTAGCTACTCGCCTGATAAAGTGCTCCAAGGCAGAATCCTCTCCTATCCAGATGCCCAACGCTATCGGCTGGG
TGTCAATTATGAACAGATCCCGGTCAACCAATGCCTATTCGCAGTACATAATTATCAACGCGATGGGTTGATGACCGTAA
CTAACAATGGAGATGGTTCCGCAAATTATTACCCAAACAGTTTTGATCAATTATTTATTGAGCATGAGTATAAGGAGCTT
CCTATAAAACTGAGCAACGCCATAGCCGACTGGTATGATAGAAATAGCGAAGGAGAAAATGACCATTATAGCCAACCCGG
GGTTTTATTCAGGGAAGTGTTGGATGATAAAGAGCGCGGCGACCTCTGTTTAAATATCATCAAGTCAATGCAGGGCATTA
CCGGTGAAAAATCGCTGGAAATTATTCATCGCCAGCTTTACCATTTCTGCCAAGTAGATCAGACGCTGGCACAAATAATA
GCAGAAGGTTTAGGTGTTAGCCCGCCCTCTTATCAGAGCAGCCCCTGTGTCAAAAACCAAAAGATCAATACACCAATACC
GTTTACCCATTAA

Protein sequence :
MEDLFKLRSASGIPYVYEQDSRSVGPRGPLLLEDYILHEKMAHFNRERIPERVVHAKGSAAFGTFTVTKDITRYTRAKLF
NQLGKQTKIILRMSTIAGEKGSADSERDPRGFAVKFYTEDGNWDLVGNNTPVFFIKDPKKFSDFIHSQKRDPYHNLRSAT
RIWDFFSFNPESLHQVLILMSNRGTPYGLRHMHGYGSHAFSMINAKNERVYVKFHFRTQQGIKNFSHDEALQMRSADPDF
SQRDLFEAIESGNFPKWTLFIQVMTTDQCSKLAFNPFDITKTWSQKEFPLIEVGVLELNKNPSNYFAQVEQLAFAPAHVI
DGISYSPDKVLQGRILSYPDAQRYRLGVNYEQIPVNQCLFAVHNYQRDGLMTVTNNGDGSANYYPNSFDQLFIEHEYKEL
PIKLSNAIADWYDRNSEGENDHYSQPGVLFREVLDDKERGDLCLNIIKSMQGITGEKSLEIIHRQLYHFCQVDQTLAQII
AEGLGVSPPSYQSSPCVKNQKINTPIPFTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 3e-115 53
katA YP_005126717.1 catalase Not tested Not named Protein 2e-96 44
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-91 43
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-91 43
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-91 43
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-91 43