Gene Information

Name : Sph21_4769 (Sph21_4769)
Accession : YP_004319946.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 5676206 - 5676952 bp
Length : 747 bp
Strand : +
Note : PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sli:Slin_2186 short-chain dehydrogenase/reductase SDR; SMART: polyketide synthase/Fatty acid synthase, KR

DNA sequence :
ATGAACAATAATATCAAAGGAAAAGTAGTCGTAATAACTGGTGCAAGTAGCGGATTAGGTAAAGCTACTGCCCAACTTTT
ATCGAAAGAAGGAGCTATACTGGTATTAGCGGCCAGACGAGCAGAACGAATCGAGAAATTAGCCAATACCATTAGAGAAA
ACGGCGGAGAGGCGTTGGCCGTTCCAACAGACGTAAGCAATGCAACGCAAGTACAAAACCTTGTAGATACGGCAGTAAAA
GAATTTGGGAAGATCGATGTAATGCTGAACAATGCCGGAGTAATGCCACTATCGGCCTTAGAGGATCGAAGAATTCACGA
GTGGGAACGAATGATCGATGTAAACATAAAAGGCGTACTTTACGGTATTGCGGCCGCACTTCCATATATGAAAGAGCAGA
AATCAGGTCATTTTATAAATGTTTCTTCGGTAGCGGGGCACAAGATTTTCGGTGGATCCGCGGTTTATTCGGCCACCAAA
AGTGCCGTAAGAGTAATATCTGAAGGGTTACGTCAGGAAGTTACACCTTATAACATCCGTACGACCATCATTTCTCCAGG
TGCCGTAAAAACAGAACTGCTGGAACATATAAGCGACATTAACATCCAGGATGCTAATAAAAATTTCGTTGAAAAGATAG
GACTGAGTCCTGATGCCTTTGCCCGCCTGATTGCTTTCGCTATCAGTCAGCCGGAAGACATGGATATCAATGAAATTCTA
TTCAGGCCAACAGCACAAGAACTTTAA

Protein sequence :
MNNNIKGKVVVITGASSGLGKATAQLLSKEGAILVLAARRAERIEKLANTIRENGGEALAVPTDVSNATQVQNLVDTAVK
EFGKIDVMLNNAGVMPLSALEDRRIHEWERMIDVNIKGVLYGIAAALPYMKEQKSGHFINVSSVAGHKIFGGSAVYSATK
SAVRVISEGLRQEVTPYNIRTTIISPGAVKTELLEHISDINIQDANKNFVEKIGLSPDAFARLIAFAISQPEDMDINEIL
FRPTAQEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 2e-50 52
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 8e-48 47