Gene Information

Name : Sph21_4255 (Sph21_4255)
Accession : YP_004319448.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 5120484 - 5122565 bp
Length : 2082 bp
Strand : +
Note : PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: chu:CHU_1983

DNA sequence :
ATGAAATCAGAAAAAAAATCACTGTTTCAACAAGAGCTCGTTAGTGAAGCTTTTAAACAGTCGTTCATAAAACTCAGTCC
CCGGATCATGTTCCGCAATCCCGTTATGTTTACGGTGGAGATAGGGACCTTTGTCATGTTCGGTGTATGCATTTGGACAC
TCATGGGCGAGAAATCGCAAGGGAGCATTGCCTACAACCTATCTATTTTCTTTGTGCTTTTTATAACCCTCCTTTTTGCC
AATTTTGCGGAGGCTATAGCCGAAGCACGAGGTAAAGCCCAGGCCGACTCATTGAGAAGGACCCGGGAGGAGACTCCAGC
CAAACGTTTGGCATCCGATGGCAGCATTACGCAAATCGCGTCTTCCTCCCTTCGAAAAGGAGATGTTTTCTTTTGCGAGG
CGGGGGATATCATACCTACCGACGGCGAAATTATTGAAGGCTTAGCAACAATTGACGAAAGTGCCATCACCGGTGAATCG
GCTCCGGTTATCCGCGAAGCAGGAGGCGATAAAAGCAGTGTAACCGGCGGAACGAAGGTCTTGTCTGATCGCATCCGCGT
ACGCGTAACAACAGAACCCGGAGAGAGTTTCCTCGATAAGATGATTGCATTGGTAGAAGGGGCTAGTAGGCAAAAAACGC
CTAATGAAATTGCATTGACTATTTTGCTTGCGGGTTTCACTTTGGTATTTATTATTGTTTGTGTTACGCTAAAACCATTT
GCTGACTATGCAAATACACCGATCACCATTGCTGCGTTTATCTCCTTGTTCGTATGTTTAATACCTACGACCATCGGTGG
ACTGCTAAGCGCCATCGGAATTGCGGGCATGGACCGTGCTTTGCGAGCCAACGTCATCACGAAGAGCGGTAAAGCCGTAG
AAACCGCGGGCGACATTGATGTATTATTGTTGGATAAAACAGGTACCATAACGATTGGCAACCGAAAGGCAACGCACTTT
TACCCCGCCCAAGGCGTGGATGACAAACGATTTATAAGGGCTGCGGTTCTGAGTTCATTAGCGGATAAGACTCCTGAGGG
CAAATCGATCATTGAATTGTCCATAAATCCTGAACACAAATTTGCTGCCATGGGTACTACCCTATTGAGTGAAGCTTCAA
AAAATCGAAGCAAATTGCAATTTATTGGCTTTACGGCCGAAACGAGATGTTCAGGGGTTGATCTCGAAGATGCGACCAAA
ATACGGAAAGGGGCGACCGATGCAATACGGAACTTAGTCGAAAAAAGTGGAAACAACTTTCCGAAAGAAATAATCGGCCG
TGTTGAGGAAATTTCTTCAAACGGAGGAACACCCTTGGTCGTTTCTGAAGAGGACGCCACGGGAAATGTACAGGTTCTAG
GCGTCATAGAACTTCAAGATATTATTAAACCAGGCATTCAGGAGCGTTTCTCCCGGCTTCGAAAAATGGGTATCAAAACG
GTCATGGTGACCGGGGACAATCCATTAACTGCCAAATTTATCGCAAATAAGGCTGGAGTGGACGACTTTATTGCAGAAGC
GAAACCAGAAGATAAGATGAACTATATCCGAAAGGAACAAGCTTCCGGTAGGCTGGTAGCTATGATGGGTGACGGAACAA
ATGATGCGCCCGCTCTTGCACAAGCAGACGTAGGAGTTGCCATGAACAGTGGTACGCAGGCGGCGAAAGAAGCTGGCAAT
ATGGTGGATTTGGATAACGATCCTACCAAGCTGATTGAAATTGTAGAGATTGGAAAACAGTTACTTATGACTCGAGGTAC
GCTAACCACGTTTTCGATAGCTAACGACGTGGCAAAATATTTTGCGATCATTCCTGCGTTGTTCATCAGCGCGATTCCCG
CCTTGCAGGGACTTAATATTATGGACTTGCACAGCCCGGAAAGTGCTATACTTTCTGCTGTTATTTTCAACGCAATTATT
ATCCCCCTCCTCATTCCATTAGCGTTAAAAGGTGTCGCCTATAAACCGATCGGCGCCAGTGCCCTTTTAAGGAGAAATCT
TTTCATCTATGGATTGGGAGGCATCATCATACCTTTTATCGGCATCAAGTTGATCGACGTTATGGTAGCACTGTTTATAT
AG

Protein sequence :
MKSEKKSLFQQELVSEAFKQSFIKLSPRIMFRNPVMFTVEIGTFVMFGVCIWTLMGEKSQGSIAYNLSIFFVLFITLLFA
NFAEAIAEARGKAQADSLRRTREETPAKRLASDGSITQIASSSLRKGDVFFCEAGDIIPTDGEIIEGLATIDESAITGES
APVIREAGGDKSSVTGGTKVLSDRIRVRVTTEPGESFLDKMIALVEGASRQKTPNEIALTILLAGFTLVFIIVCVTLKPF
ADYANTPITIAAFISLFVCLIPTTIGGLLSAIGIAGMDRALRANVITKSGKAVETAGDIDVLLLDKTGTITIGNRKATHF
YPAQGVDDKRFIRAAVLSSLADKTPEGKSIIELSINPEHKFAAMGTTLLSEASKNRSKLQFIGFTAETRCSGVDLEDATK
IRKGATDAIRNLVEKSGNNFPKEIIGRVEEISSNGGTPLVVSEEDATGNVQVLGVIELQDIIKPGIQERFSRLRKMGIKT
VMVTGDNPLTAKFIANKAGVDDFIAEAKPEDKMNYIRKEQASGRLVAMMGDGTNDAPALAQADVGVAMNSGTQAAKEAGN
MVDLDNDPTKLIEIVEIGKQLLMTRGTLTTFSIANDVAKYFAIIPALFISAIPALQGLNIMDLHSPESAILSAVIFNAII
IPLLIPLALKGVAYKPIGASALLRRNLFIYGLGGIIIPFIGIKLIDVMVALFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 8e-143 56
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 7e-148 56
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 5e-148 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-140 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-140 55