|
Name : Sph21_0409 (Sph21_0409) Accession : YP_004315661.1 Strain : Sphingobacterium sp. 21 Genome accession: NC_015277 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 459863 - 462442 bp Length : 2580 bp Strand : - Note : KEGG: phe:Phep_1132 ATPase AAA; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGGAAGCAAAATTCTCGCCACGCGTAAAAGACGTTATCTCCTATAGCAGGGAAGAAGCGCTTCGACTTGGACACGACTA CATCGGCACCGAGCACCTCTTGCTGGGCCTGATCCGCGAGGGAGATGGTTTAGCAATCAAAATATTAAAGCATGTGGGGG TAGATACTGCCCGTTTACGCCGCTCCATCGAAGAGGCTGTAAAAGGGACGTCATCCACTTCGGCTAATCTTGGCAATATT CCACTGACGAAGCAGGCGGAAAAAGTGCTCAAGATTACTTACCTAGAAGCTAAGATATTTAAGAGCGAAATTATTGGCAC CGAGCATCTATTACTTTCTATCTTAAGAGACGAAGATAATATTGCTTCTCAGATACTTCAGCAATTCCATATCAATTATG ATATTTTCAAAGCTGAGGTAGAGCAGAACAAAACGGAAATCACCGACCAAGCAGCCGGTTCGGCTGCGGGAGATGATGAT TTCCGCGATGAAGATAGCTTCAGCCAACCTAAAAAAGTGTCAGATATTAAATCGAAAACCCCGGTACTGGATAACTTTGG TCGCGACTTGACCAAAGCTGCAGAAGAAGGACGTTTAGATCCAATCGTTGGACGTGAAAAAGAGATTGAACGCGTATCTC AGATTCTTTCACGTCGTAAAAAGAATAACCCGATTTTAATTGGTGAACCGGGAGTTGGTAAATCGGCTATTGCCGAAGGC TTAGCCTTGCGCATTGTACAACGGAAAGTTTCTAGGGTGCTCTTTAACAAGAGAGTAGTTACCTTAGATTTGGCTTCCCT AGTCGCAGGTACTAAATACCGCGGTCAATTTGAAGAGCGGATGAAGGCGGTGATGAATGAACTCGAAAAATCACCTGATG TGATTTTATTTATCGATGAAATTCATACCATCGTGGGCGCCGGCGGAGCTTCCGGATCACTGGATGCTTCGAACATGTTT AAACCGGCTTTGGCACGTGGAGAAATTCAATGTATCGGAGCTACTACGCTGGATGAATATCGCCAGTATATTGAAAAGGA TGGCGCCTTGGACCGTCGTTTCCAAAAAGTAATGATCGAACCGGCAACGCATGAGGAGACGATTGAAATTCTTAACCGTA TCAAGGATAAGTATGAAGAGCACCACGCGGTAACTTTTACACCGGAGGCGATTGAAGCCTGTGTGAGTTTAACTACTCGC TACATTACTGACCGATTCTTGCCGGACAAGGCTATTGATGCCTTGGATGAAGCAGGGTCACGTGTTCACCTAACAAATAT TCATGTTCCTCAGAGCATCATTGATATTGAAGAGAAAATCGAAGATATCAAAGTGGAGAAGAATAAAGTAGTTCGTAGTC AGAAGTATGAGGAAGCTGCTAAGCTTCGTGATACGGAGAAGAAATTACTGGAAGAGTTGGATCGTGAAAAGCAAGCTTGG GAAGCAGAAACGAAAACCAAACGTTATACCGTTACGGAAGATGATGTTGCTCAAGTGGTGTCGATGATGACCGGTATTCC GGTTCAACGTGTTGGACAAACCGACAGCCAAAAGCTGCTAAACATGGCTGAATCGATGAAAGGAAGGATTATCGGGCAGG ACGATGCGGTGAAGAAACTTGTGAAGGCGATTCAACGTACCCGTGCTGGTTTGAAAGATCCGAAAAAGCCAATTGGTTCC TTTATCTTCTTAGGGCCTACAGGTGTCGGTAAAACGGAATTAGCGAAAGAGTTAGCACGTTTTATGTTCGACAGCGAGGA TTCTTTGATCCAGATCGATATGAGTGAATACATGGAAAAATTTGCTGTATCACGTTTGGTAGGAGCGCCTCCGGGCTATG TAGGTTATGAAGAAGGTGGACAGCTAACTGAGAAGGTGCGTCGTAAACCTTATTCGGTCGTTTTATTGGATGAGATCGAA AAGGCACACCCGGATGTATTCAACTTATTGTTACAGGTGTTGGACGAAGGACAGTTAACCGATAGTTTGGGTAGAAGGGT AGACTTCAGAAATACGATCGTTATCATGACTTCGAATATCGGTGCCCGCCAGTTGAAAGACTTTGGTCAAGGCGTCGGTT TCACAACCAGCGCGAAAGCTACGCAGGCTGAGACGCATTCACGAAGTGTAATTGAGAATGCATTGAAGCGTGCCTTTGCT CCTGAATTTTTAAACCGTGTGGATGATGTGATTGTCTTCAATTCGCTTGGTAAAGAAGAGATCTTTAAGATTATCGATAT TGAGTTGAAAGCATTGTTTACCCGCATCCAAGGCTTAGGATACACGGTGAACTTAACCGATGGAGCGAAGGAGTTCATTG CGGAGAAAGGCTTCGACAGTAATTTTGGCGCTCGTCCGTTGAAACGTGCTATTCAGAAGTATCTGGAAGATCCGATTGCA GAGGAGATCCTGAAAGGTGACTTGGCAGATGGTGCTACGTTGGAAATCGATTACAATAAGGAAAAAGAAGAGATTGTAGT GAACGGTTCACATAAAAGCGATAGTAAGAAGTCGGCTAAGCCAACAGATATCGAAAAAGAACAGCATGAAGATGAAAAAG ACGAAAGCAATAGCAAGTAG Protein sequence : MEAKFSPRVKDVISYSREEALRLGHDYIGTEHLLLGLIREGDGLAIKILKHVGVDTARLRRSIEEAVKGTSSTSANLGNI PLTKQAEKVLKITYLEAKIFKSEIIGTEHLLLSILRDEDNIASQILQQFHINYDIFKAEVEQNKTEITDQAAGSAAGDDD FRDEDSFSQPKKVSDIKSKTPVLDNFGRDLTKAAEEGRLDPIVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIAEG LALRIVQRKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFIDEIHTIVGAGGASGSLDASNMF KPALARGEIQCIGATTLDEYRQYIEKDGALDRRFQKVMIEPATHEETIEILNRIKDKYEEHHAVTFTPEAIEACVSLTTR YITDRFLPDKAIDALDEAGSRVHLTNIHVPQSIIDIEEKIEDIKVEKNKVVRSQKYEEAAKLRDTEKKLLEELDREKQAW EAETKTKRYTVTEDDVAQVVSMMTGIPVQRVGQTDSQKLLNMAESMKGRIIGQDDAVKKLVKAIQRTRAGLKDPKKPIGS FIFLGPTGVGKTELAKELARFMFDSEDSLIQIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIE KAHPDVFNLLLQVLDEGQLTDSLGRRVDFRNTIVIMTSNIGARQLKDFGQGVGFTTSAKATQAETHSRSVIENALKRAFA PEFLNRVDDVIVFNSLGKEEIFKIIDIELKALFTRIQGLGYTVNLTDGAKEFIAEKGFDSNFGARPLKRAIQKYLEDPIA EEILKGDLADGATLEIDYNKEKEEIVVNGSHKSDSKKSAKPTDIEKEQHEDEKDESNSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-178 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sph21_0409 | YP_004315661.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 52 |
| Sph21_0409 | YP_004315661.1 | ATPase AAA | VFG0080 | Protein | 3e-142 | 49 |
