Gene Information

Name : Sph21_0362 (Sph21_0362)
Accession : YP_004315614.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Resistance
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 398405 - 399613 bp
Length : 1209 bp
Strand : +
Note : PFAM: Major facilitator superfamily MFS-1; KEGG: sli:Slin_4881 major facilitator superfamily MFS_1

DNA sequence :
ATGAAATCTACATCTCGCGCAGCTTTTGCGTTTATTTTTATTACGGTGCTTATTGACATCACCGGGATTGGCTTGATTTA
CCCTGTTTTACCGAAACTGATCTCCAACCTGATTCACGCCGACATAAGCATAGCAGCTGAATACGGCGGTTGGCTCACCT
TTGCCTATGCGATGATGCAATTTATATGTGCTCCTATCATGGGCAACTTAAGTGATCGGTATGGCAGACGTCCTATCCTT
CTTTTATCGCTCTTTGGATTCGGGATGGATTGTCTTTTGATGGCCTTCGCTCCTACTATCTGGTGGTTATTTTTAGGCCG
CATTATAGCTGGCGCTATGGGCGCCAGCTATACCGTCGCTTCTGCCTATATTGCCGATATCAGCAGTCCTGAAAAACGCG
CACAAAACTTTGGTTTAATCAGTGCAGCTTTTGGTGTTGGCTTTATTATCGGACCCGTTATAGGAGGACTACTAGGAAAA
TATGGTACACATGCCCCCTTTCTTGTAGCGGGGCTGCTTAGTTTTCTAAATTTATTGTACGGCTTCTTTGTTTTGCCTGA
GTCTTTAAAAAAAGAAAATCAACGTCCATTCGATTGGTCTCGTGCTAACCCAATCGGTTCCTTCAAACATCTAAGTAAAT
TTCCCGCAGTTGCCGGACTCATACTTAGTTTGCTGCTAATCAACATTGCAGGCCACTCCATGGAAAGTATATGGTCGTTT
TTTACGATCGAAAAATTCAAATGGAACGAACAGGAAATTGGTTATTCTCTTGGTTTTATGGGGGTGGCTTTTGCCGCTGT
TCAAGCAGGTTTAACTCGTATTTTGTTACCTAAACTGGGAGAAAAACGTGCCATCGTTATTGGCATAATGCTCTATACGA
TTAGCTTAACGTTATTTGCTTTTGCTAGCCAAAGTTGGATGATGTACGCCTTCCTTATCCCTTATGCCTTAGGCGCGATT
GCCAATCCTGCGCTTCAAGGTTTCTTATCCAACCAGATACCGGATAATGAGCAAGGTGAATTACAAGGCGGCTTAACGAG
TTTAATGAGTATGGGCGCTATTATCGGACCACCGATTATGACCTTTTTATTCGCCAGATTTGCAGGGGCTAATGCACCGA
TATATTTTCCGGGAGCACCTTTTTCTTTCGCGGCCTTATTAATGTTCGCTAGCCTGCTACTCGTTTTCAAGAGTTTGAGG
AAAGGGTAG

Protein sequence :
MKSTSRAAFAFIFITVLIDITGIGLIYPVLPKLISNLIHADISIAAEYGGWLTFAYAMMQFICAPIMGNLSDRYGRRPIL
LLSLFGFGMDCLLMAFAPTIWWLFLGRIIAGAMGASYTVASAYIADISSPEKRAQNFGLISAAFGVGFIIGPVIGGLLGK
YGTHAPFLVAGLLSFLNLLYGFFVLPESLKKENQRPFDWSRANPIGSFKHLSKFPAVAGLILSLLLINIAGHSMESIWSF
FTIEKFKWNEQEIGYSLGFMGVAFAAVQAGLTRILLPKLGEKRAIVIGIMLYTISLTLFAFASQSWMMYAFLIPYALGAI
ANPALQGFLSNQIPDNEQGELQGGLTSLMSMGAIIGPPIMTFLFARFAGANAPIYFPGAPFSFAALLMFASLLLVFKSLR
KG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 4e-55 44
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 4e-55 44
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 4e-55 44
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 6e-55 44
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 3e-55 44
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 2e-55 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sph21_0362 YP_004315614.1 major facilitator superfamily protein Y19114.gene.p01 Protein 7e-56 45
Sph21_0362 YP_004315614.1 major facilitator superfamily protein AY264780.2.gene3.p01 Protein 4e-55 44
Sph21_0362 YP_004315614.1 major facilitator superfamily protein X75761.gene.p01 Protein 1e-54 44
Sph21_0362 YP_004315614.1 major facilitator superfamily protein NC_010410.6002597.p0 Protein 1e-55 44
Sph21_0362 YP_004315614.1 major facilitator superfamily protein CP001485.1.gene2821. Protein 1e-55 44
Sph21_0362 YP_004315614.1 major facilitator superfamily protein AF534183.gene.p01 Protein 2e-55 44
Sph21_0362 YP_004315614.1 major facilitator superfamily protein NC_011586.7045189.p0 Protein 6e-52 43
Sph21_0362 YP_004315614.1 major facilitator superfamily protein AF090987.gene.p01 Protein 7e-46 43
Sph21_0362 YP_004315614.1 major facilitator superfamily protein AY743590.gene.p01 Protein 3e-47 41