Gene Information

Name : Sph21_3587 (Sph21_3587)
Accession : YP_004318794.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0491
EC number : -
Position : 4384655 - 4386064 bp
Length : 1410 bp
Strand : +
Note : KEGG: msv:Mesil_2631 rhodanese domain protein; PFAM: beta-lactamase-like; Rhodanese-like; SMART: Rhodanese-like; beta-lactamase-like

DNA sequence :
ATGTTTTTTGAACACGTTTATGATAAGAGTTTGGCACAGGGCAGTTACCTGATAGGCTGTCAGGCTACGGGCGAAGCCAT
CGTAATAGATGCCCAAAGGGATATAGATATATATCTCGACATTGCAAAACAAAACAATTTGCGTATCACGCACATTACAG
AAACCCACATACACGCAGACTTTCTCTGCGGTTCGAGGGAATTGGCGGCAGTAACCGGAGCAACGATGTACCTTTCGGAC
GAGGGAGGCGAAGACTGGCAATATCAGTTCCCGCATAAGGGGCTGAAAGACGGCGATGTGATTAAGGTAGGCAACCTCAC
ACTGGAGGTAATGCACACACCCGGACACACGCCCGAAAGCATCAGCTTTTTGCTGACCGACCACCCTGCAACGGACAAGC
CCGTAATGGTATTTACAGGCGATTTCGTATTCATCGACGATATAGGTCGCCCCGATTTGCTGGAAAAAGCCGCAGGGCTT
ATCGGAACAAAAGAAGCCGGAGCAAAACAGATGTTCCAATCGTTGAAAAAGTTTGCCGCATTGCCCGAATATGTACAGGT
ATGGTCGGCACACGGAGCAGGTTCAGCTTGCGGAAAGGCTTTGGGAGCGGTACACAGTTCGACCGTTGGTTATGAAAAAA
TCCGTAATTGGGCGTTCCAATATGGCGAAGACGAAAAAGGCTTTACCGATTACCTGTTAGCCGACCAGCCCGAGCCGCCT
AAATATTTTGCGATGATGAAGCACCTCAATAAAGTACCTCGTACTTTGTTGGTTGAAGTGCCGAAACACCCGAAATTGAG
CAAAGAGCAGTTTATTTCCGCTTATGAAAAAGGCATTAAGGTCATAGATACCCGCAATAAAGTGGATTTTGCCAACGGCT
TTATTCCCAACAGCCTGAACATTCAGGGCAATAACTCCTTTTCTACGTGGTGCGGTTGGTTGCTGAACTATCAGGAGCAG
TTTATATTGGTAGCCGATGACAGCCAAATGGAAGACCTGACCCGTAAGCTGATGCGTATCGGCTTGGACAATATTTACGG
TTACATTTCAGATGTCAATGATTTGGGTATTGAACTGAAAACAGCAAATGTGATTTCGTTGGACGAATTTAAAACCTACA
TAGGCAAAGATAATGTACAGATAGTAGATGTTCGGGGAGTAACGGAGTATGAAGCCGGACACGTTGAGGGAGCAGAAAAT
GTGTTTGTCGGAACATTGCCGGACAACCTGGATAAAATCAGTAAAGACAAGCAGGTGGTCATTCACTGTCAGGCAGGCGA
CCGTTCGGCAGTAGCGTATTCCATTCTTGCCAAAAATGGTTTTGAAAACGTAAAGAACTTTTCGGGCGGAATGAAAGAAT
GGCTGGCAGCCAATGGTAAGACAACGGACTGTACTTGTACTAACGCTTAA

Protein sequence :
MFFEHVYDKSLAQGSYLIGCQATGEAIVIDAQRDIDIYLDIAKQNNLRITHITETHIHADFLCGSRELAAVTGATMYLSD
EGGEDWQYQFPHKGLKDGDVIKVGNLTLEVMHTPGHTPESISFLLTDHPATDKPVMVFTGDFVFIDDIGRPDLLEKAAGL
IGTKEAGAKQMFQSLKKFAALPEYVQVWSAHGAGSACGKALGAVHSSTVGYEKIRNWAFQYGEDEKGFTDYLLADQPEPP
KYFAMMKHLNKVPRTLLVEVPKHPKLSKEQFISAYEKGIKVIDTRNKVDFANGFIPNSLNIQGNNSFSTWCGWLLNYQEQ
FILVADDSQMEDLTRKLMRIGLDNIYGYISDVNDLGIELKTANVISLDEFKTYIGKDNVQIVDVRGVTEYEAGHVEGAEN
VFVGTLPDNLDKISKDKQVVIHCQAGDRSAVAYSILAKNGFENVKNFSGGMKEWLAANGKTTDCTCTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0046 YP_184956.1 metallo-beta-lactamase Not tested Type-I SCCmec Protein 1e-79 42
unnamed BAA86645.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-79 42
unnamed BAB83478.1 - Not tested SCC 12263 Protein 2e-80 42