Gene Information

Name : Sph21_3514 (Sph21_3514)
Accession : YP_004318722.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 4312301 - 4313035 bp
Length : 735 bp
Strand : +
Note : PFAM: acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: phe:Phep_2582 3-deoxy-manno-octulosonate cytidylyltransferase

DNA sequence : 
ATGAACATTATAGGTATTATTCCCGCGCGTTATGCGTCGACACGGTTTCCAGGCAAGCCATTAATAGATATTAACGGAAA
AAGTATGATCCGGCGGGTCTATGAACAGGCGCTTAAGGCTTCTTCCCTCAAACGTGTGGTGGTAGCAACGGATGACGAGC
GGATCGCTCATCATGTGCAAAACTTCGGCGGTAATGTAATTTTAACGGCAAGTTCGCACCAAAGCGGAACGGATCGTTGT
GCAGAAGTGATTGCTAAAGAGAATTCTTTCGATATTGCTATTAATATACAGGGAGACGAGCCTTATATAGATCCCGCCCA
AATCGATTTGCTGGCGAGTTGTTTTGAAGATAAGGAGACGCAGATTGCGACACTTGTGAAGGAAATAAGAGACCATGAGG
AGCTGTTTAATAATAACAGCCCTAAAGTGTTGCTAAATATGGATCGAGAAGCGATCTATTTTAGTCGCGCGACCTTACCC
TTTTTAAGAGGAGTTCCGACAGAAAAATGGCTTGATCATCATAAATTCTATAAGCATATTGGTATTTATGGATACCGTTG
CGAAATATTAAAGCTTTTAACGGCACTTCCGATTTCGAGTCTGGAAAAGGCGGAATCCTTGGAGCAGTTACGCTGGATAG
AAAATGGTTATCGTATTAAAACAGCGGAAACGCTGGTCGAAACAGTAGCTATTGACGAACCGAAGGATCTGCATAAAGTT
AAACAATTAAAATAA

Protein sequence : 
MNIIGIIPARYASTRFPGKPLIDINGKSMIRRVYEQALKASSLKRVVVATDDERIAHHVQNFGGNVILTASSHQSGTDRC
AEVIAKENSFDIAINIQGDEPYIDPAQIDLLASCFEDKETQIATLVKEIRDHEELFNNNSPKVLLNMDREAIYFSRATLP
FLRGVPTEKWLDHHKFYKHIGIYGYRCEILKLLTALPISSLEKAESLEQLRWIENGYRIKTAETLVETVAIDEPKDLHKV
KQLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-40 45
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-40 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-40 45