Gene Information

Name : Sph21_3363 (Sph21_3363)
Accession : YP_004318573.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 4154878 - 4155843 bp
Length : 966 bp
Strand : -
Note : TIGRFAM: KpsF/GutQ; KEGG: phe:Phep_2063 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); cystathionine beta-synthase, core

DNA sequence :
GTGAAAACCAAATCCGACATTGAAAATATTGCCATTTCCGCACTTACATTAGAAGCCGAAGCGATCAGTAAACTGACAAA
AAATATCAACGAAGATTTTATCAACACCGTACATGCCATACTCGATATAAAGGGCCGCGTAATTATTACAGGAATAGGTA
AAAGTGCTATCATCGCACAGAAAATTGTTGCCACCATGAACTCTACAGGAACACCGGCAATTTTCATGCATGCGGCAGAC
GCCATTCACGGAGATTTAGGGATGCTACAACAAGAAGATATTGTAATAGCCATCTCTAAGAGCGGAAATACTCCGGAAAT
TAAAGTGCTTGTACCACTGCTTAAAAATTCCAACGCAAAGATAATCGCAATGGTTGGAAATACAAAATCATATTTGGCTG
AACAAGCCGATTTTATACTGGACACGACCGTGTCCAGAGAGGCCTGTCCCTTGAACCTGGCACCAACTACCAGCACAACA
GCCCAGCTGGCTATGGGCGATGCGCTCGCTATTTGTCTTCTGGAATGTCGATCTTTCACAAATGACGACTTTGCTAAGTA
TCATCCGGGGGGTGCGCTAGGGAAACGCTTATATCTCAAAGTAACCGATTTAGCGCGCCAGAATGCAAAGCCCGAGGTGA
AAAGTGATACGCCTATTAAAGCTGTCCTGGTGGAAATAACCAAGAATCGATTAGGTGCTGTTGCCGTCGTGAACGATAAA
AAAATAAGTGGGATTATCACCGATGGCGATATCCGTAGAATGCTCGAGTCGAATCAGGATATCGGGAAATTAAAGGCCGA
AGATATCATGGGCAATAACCCCAAGGTGATTCAATACGATGAGCTGGCCGTTCATGCGCTCAATATGATGCGAAACAATC
ATATCACCCAATTACTGGTAGTCCGCAATAATCAATATGATGGTATTGTCCATTTACATGATCTTTTGAATGAGGGGATT
ATTTAG

Protein sequence :
MKTKSDIENIAISALTLEAEAISKLTKNINEDFINTVHAILDIKGRVIITGIGKSAIIAQKIVATMNSTGTPAIFMHAAD
AIHGDLGMLQQEDIVIAISKSGNTPEIKVLVPLLKNSNAKIIAMVGNTKSYLAEQADFILDTTVSREACPLNLAPTTSTT
AQLAMGDALAICLLECRSFTNDDFAKYHPGGALGKRLYLKVTDLARQNAKPEVKSDTPIKAVLVEITKNRLGAVAVVNDK
KISGIITDGDIRRMLESNQDIGKLKAEDIMGNNPKVIQYDELAVHALNMMRNNHITQLLVVRNNQYDGIVHLHDLLNEGI
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-50 41
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-50 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-50 41