Gene Information

Name : Sph21_3356 (Sph21_3356)
Accession : YP_004318566.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4146227 - 4146907 bp
Length : 681 bp
Strand : -
Note : KEGG: bth:BT_0990 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transducti

DNA sequence : 
ATGCATATTCTTATCATTGAAGACGAATCGCGTATTGCTCAATTACTTCAACGCGGGTTGGAGGAACTGGGATACAAAAC
TACCGTGGCCTATGATGGTATACTGGGTAAAAAGCTGGTATGGCAACAGGCTTACGACCTGATTATTATGGACATTATCC
TTCCTAAAATCAACGGCATAGATCTATGCCGCGAGATTAAAGAAAGCTACCCGGATTTGCCTATTATTATGCTCACAGCC
TTAGGAACAACAGACGATAAATTGGAAGGTTTTGATGCAGGGGCTGACGATTACCTGGTTAAGCCGTTTGATTTTAGAGA
ATTGGAGGCCAGAATCAGGGTTTTGCTTAAAAGGGGCTCCGCTAGCAATTCAGCAAGTACTGCTATATTAAAGGCGGGCG
AACTGGAAATGAATTTACATACGCGGATCGTAAAACGGGGCAACGTTGAGATCAATCTCACGCCGAAAGAGTTCAAACTG
TTAGAGTATATGATCCGCAACAAAGGAAGAGTTCTCCCGCGCGTTGAAATAGCAGAAAAAGTATGGGATACCACTTTTGA
CACGGGGACTAATTTTATTGATGTATACATCAACTATTTGCGTAACAAAATTGACAAAGCTTTTGAAGAAAAATATATAC
ATACCAAACCGGGAATGGGGTTTATTTTCAAGACTGAATAA

Protein sequence : 
MHILIIEDESRIAQLLQRGLEELGYKTTVAYDGILGKKLVWQQAYDLIIMDIILPKINGIDLCREIKESYPDLPIIMLTA
LGTTDDKLEGFDAGADDYLVKPFDFRELEARIRVLLKRGSASNSASTAILKAGELEMNLHTRIVKRGNVEINLTPKEFKL
LEYMIRNKGRVLPRVEIAEKVWDTTFDTGTNFIDVYINYLRNKIDKAFEEKYIHTKPGMGFIFKTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0111 Protein 6e-45 47
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0347 Protein 2e-39 44
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-42 43
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-40 42
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 2e-32 42
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0308 Protein 2e-37 42
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0638 Protein 4e-35 42
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator BAC0197 Protein 8e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sph21_3356 YP_004318566.1 winged helix family two component transcriptional regulator VFG0596 Protein 4e-35 41