Gene Information

Name : Sph21_0283 (Sph21_0283)
Accession : YP_004315535.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Resistance
Product : ATPase P
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 304893 - 306983 bp
Length : 2091 bp
Strand : -
Note : TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: zpr:ZPR_3414 copper-transporting ATPase, P-type (CopB); PFAM: ATPase, P-type, ATPase-associated doma

DNA sequence :
ATGGAACATTCTCATTCTCAAGGAAACGATGCCGCTCATCACGGCCACCATGGCCATGGTCATAATGCTCATGAACAGAT
TAAGAATTCAAAACCAGAACACGAGGCAAACCATGAACACAATCGACCCATGGGGCATGCGGGACACGACCATCATGCGA
TGATGATTGCTGATTTCCGTAAGCGCTTTTATGTAGTGCTAATACTTACCGTTCCAATACTTCTCCTGTCTCACATGATT
CAGCAATGGCTTAATATTTATATCGAATTTCCGGGAGATCAATATGTTCTGGCCGCACTTTCATCATTCGTATTCTTTTA
CGGCGGATGGCCTTTCCTTAAAGGGTGGGCGGATGAAATGCGTAGTAAAGATCCAGGCATGATGACGCTGATTGGTTTTG
CCATCACAGTTGCCTATGGATATAGTGTTGCAACGGTATTTGGACTAGCGGGGATGGATTTTTTCTGGGAACTGGCAACC
TTGATCCTGATTATGCTGTTGGGGCATTGGATCGAAATGAAATCCATTGCCGGTGCCTCCAGAGAGCTTGAATTGCTCGT
ACAACTGATGCCGGACGAAGCGCATCTGATAACGGGTGACCATGTCAATGACATCAAAACTGCTGATCTGAAAAAAGACG
ATGTCATACTGATCAAACCTGGGGAGAAAGTTGCAGCCGATGGCACCATCATAGACGGTGAAAGTTTTTTAAATGAAAGC
ATGCTTACAGGTGAGTCGAAACCAGTGCTGAAGCGGAAAGGAAATGAAGTAATTGCCGGATCTATTAACGGAAACGGAGC
CATCCGGATTTCAGTCGCACATGGGGCAGAACAATCCTATTTATCTCAAGTGATTCAACTTGTTCAGGACGCACAGCATT
CGAAATCCAAAACGCAGCTCCTGGCCAATACTGCTGCCAGATGGCTTACCTTGATCGCTATCTTGGCAGGTATCATAACT
TTCTCTTACTGGTATTTTGCAGGAGGGAAAGATTTGGCCTTTTCCATCGAGCGTATGGTCACCGTAATTGTTATCTGCTG
TCCTCATGCACTTGGTTTAGCCGTTCCTTTGGTAGTTGCCAAATCGACTGCTCAATCCGCTAAAAATGGTTTGTTAATTA
AAAATCGGACTGCCTTTGAAAATGCTCGTAAAATCACCACCCTGGTTTTCGACAAGACAGGAACACTCACTGTTGGTAAA
TTTGAGGTATCAAAGGTCGTTAGTTATCAAAGCGGCCTGAATGAGCATGCAATACTACGATTTGCTTCGGCTTTAGAACA
AAATTCAGAACATCCCATCGCTACGGGTATTATCCAAAAGGTAAAAGAGCTTCAAATCGATATCCCAAAAACACAGAATT
TCAACGCTATCACCGGTAAAGGAGTGGAAGCTGATGTGGAGGGAAAGCAAATAAAGGTCGTTAGTCCGGGTTACCTTAAA
GAAAATAAACTGGATTTACCAGGCGAACAGGAGTCGGATGAAGCATCCACCATCGTATTTGTACTAATTGATGAAGTCCC
AATCGGCTATATTGCATTGGCCGACACGATACGTCCGGAATCTGCGGATGCTATCCGTACATTACACGACCACCATATTA
AATCCATCCTGTTAACAGGAGACAATAAAAAAGTAGCCGCATCTGTCGCTGAAAAGCTCGGTATGAATAGCTTTTTTGCA
GAGGTTTTACCTCATCAGAAACTGGAAAAAATCAAGGAACTGCAAACAAGAGGTGAATATGTGGCCATGACCGGTGACGG
TGTCAACGATGCGCCCGCACTGGCCCAGGCCGATGTGGGTATTGCCGTTGGCTCAGGATCCGATATAGCGGCAGAAACAG
CAGGTATCGTTTTGGTGAACAGTAACCCAAAAGATGTCGTTAACCTGATACTTTTTGGAAAGGCTACCTATCGCAAAATG
ATCCAAAACCTGGTATGGGCCACCGGTTACAATATTATCGCCTTACCGTTGGCTGCGGGCATCCTTTACGGTCAAGGAAT
TCTTTTGAGTCCCGCTGCGGGCGCCATTTTAATGACGGTGAGTACCGTCGTCGTTGCCATCAATGCCAGTCTATTAAAAG
TTGGAAACTGA

Protein sequence :
MEHSHSQGNDAAHHGHHGHGHNAHEQIKNSKPEHEANHEHNRPMGHAGHDHHAMMIADFRKRFYVVLILTVPILLLSHMI
QQWLNIYIEFPGDQYVLAALSSFVFFYGGWPFLKGWADEMRSKDPGMMTLIGFAITVAYGYSVATVFGLAGMDFFWELAT
LILIMLLGHWIEMKSIAGASRELELLVQLMPDEAHLITGDHVNDIKTADLKKDDVILIKPGEKVAADGTIIDGESFLNES
MLTGESKPVLKRKGNEVIAGSINGNGAIRISVAHGAEQSYLSQVIQLVQDAQHSKSKTQLLANTAARWLTLIAILAGIIT
FSYWYFAGGKDLAFSIERMVTVIVICCPHALGLAVPLVVAKSTAQSAKNGLLIKNRTAFENARKITTLVFDKTGTLTVGK
FEVSKVVSYQSGLNEHAILRFASALEQNSEHPIATGIIQKVKELQIDIPKTQNFNAITGKGVEADVEGKQIKVVSPGYLK
ENKLDLPGEQESDEASTIVFVLIDEVPIGYIALADTIRPESADAIRTLHDHHIKSILLTGDNKKVAASVAEKLGMNSFFA
EVLPHQKLEKIKELQTRGEYVAMTGDGVNDAPALAQADVGIAVGSGSDIAAETAGIVLVNSNPKDVVNLILFGKATYRKM
IQNLVWATGYNIIALPLAAGILYGQGILLSPAAGAILMTVSTVVVAINASLLKVGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-94 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sph21_0283 YP_004315535.1 ATPase P BAC0629 Protein 2e-162 57
Sph21_0283 YP_004315535.1 ATPase P BAC0079 Protein 3e-124 45
Sph21_0283 YP_004315535.1 ATPase P BAC0383 Protein 2e-107 43