|
Name : Sph21_2541 (Sph21_2541) Accession : YP_004317762.1 Strain : Sphingobacterium sp. 21 Genome accession: NC_015277 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 3133299 - 3135539 bp Length : 2241 bp Strand : + Note : KEGG: phe:Phep_4177 RNA binding S1 domain protein; PFAM: Tex-like protein, N-terminal; ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1 DNA sequence : ATGCTAACACACGAACAGCGTATTGCCGGCGATCTGTCTTTAAATGATAGACAGGTGCGGACTACCATTCAACTTTTGGA CGAAGGGGCTACCGTTCCGTTTATTTCGCGTTATCGGAAGGAATTGACAGGTAGCTTGGACGAAATACAGGTGGCAGCCA TAAGAGATCGAATAGGGCAGCTACGCGATCTTGATAAGAGACGTGAAGCGATTATCAAATCACTTACCGAATTAGGCAAG CTAAGCCCCGAGCTGCAAAGCAAGCTGGAAGAAGCAGAAACGATGGCTGTATTGGAAGATATCTATTTGCCGTACAAGCC AAAACGAAAAACCAGAGCTTCTGTAGCTAGAGAGAAAGGCTTAGAACCATTGGCGGATTGGTTGCTGAAACAGGAACAAA GCAGTGTCGAAGATTTTGCTGCAACTTTTGTTAATGACGAGAAAGGCGTAAGCTCTGTAGAGGAAGCTTTAGCGGGGGCA CGTGATATATTGGCGGAAACAATTGCCGAACATGCGGAAACGCGCGCTCAAATGCGTGATTTTTTTATGGAAAACGGCTC TTTTGCTTCTAGAGTAGTGCCCGGTAAGGAGGAAGAGGCCATCAAATATAAAGACTATTACGAGTGGACAGAACCTTTAA AAGCGGCCCCTTCTCATCGCATATTGGCTATGCGACGTGGAGAGAAGGAACAAATGCTGTATTTGGATGTTGAAGTACCG GATGATGAGGCAATCGCGCTTATCGATAATCGTTTCGTTAAGAATGCAAGTCCTGCCGCTTTGCAAATCCGTTTAGCCGT TCAAGATAGCTTTAAGCGTTTGCTTAAACCATCTATGGAAACAGAAGTTCGTTTAATTACCCGCAAGCGAGCAGATGAGG AAGCGATTCGTGTTTTCGCCGAAAACGCCCGCCAATTATTGTTAGCGGCTCCTATGGGAAGTAAACGGACATTAGCTATC GACCCCGGTTTTCGGACGGGTTGTAAAGTCGTCTGCCTGGATGAACAAGGGAAATTGCTTACCAATACCACGGTTTATCC GCATAATGGCACTGCAAAAGAAGCTGAAGCTGCTCACCAAATCCAGCTGCTCGTAAAACAATATCAAATTGAAGCGATTG CTATTGGAAATGGTACGGCTGGTAGGGAAACGGAAGATTTTGTTCGAAAATTGCAAATACCGGATGTGATCGTCGTGATG GTCAATGAAAGCGGAGCGTCCATTTACTCAGCCTCCGAAGTAGCGCGAGAAGAGTTTCCGGATTATGATATTACCGTTAG GGGAGCCGTCTCCATCGGTCGCCGATTGATGGATCCTTTGGCAGAATTAGTGAAAATCGACCCCAAATCAATTGGCGTTG GTCAATACCAACACGACGTTGATCAAAATAAATTACAGGAATCGCTTGCAGATACCGTTATAAGCTGTGTAAATGCGGTT GGAGTGGAACTGAATACCGCTTCAAAGCAAATCTTAGCTTATGTTTCCGGATTAGGTCCGGCACTGGCCCAGAGCATTGT TGAATACCGGAATCAACATGGCGCTTTTAGAAGGCGCGCTGATTTGAAAAAAGTGCCGCGACTGGGTGAAAAAGCCTTCG AACAAGCAGCTGGGTTTTTACGTATCAGAGGAGCAGAGAATCCCTTGGATGCAAGTGCAGTTCACCCCGAACGTTATGCA TTGGTAGAAGAGATGGCTAAAGACTTGGGGCATGAGGTGAACAGCTTATTAAAGGACGAGAAGCTAAGAAAAAGTATTCC CCTGAATAAATACGTGTCAGAAGAGGTCGGTTTACCAACGTTGAACGATATTTTAGCTGAGCTTTCTAAACCGGGCCTCG ATCCGCGTGAAAAGTTTGAAACGTTCTCCTTTACAGAAGGCGTTAATACGGTAAATGACTTAAAAGTAGGGATGAAACTT CCGGGCATCGTTACCAATATTACCAACTTCGGGGCTTTTGTCGATATCGGTGTGCATCAAGACGGCTTAGTGCATTTAAG TCAAATGGCTAATCGCTTTATCAAGGATCCAAATGAAGTAGTAAAAGTACATCAGCAGGTAGAAGTGACGGTTATCGAAG TGGATGCAAATAGAAATCGGATTTCTTTAAGTATGAAGACCGAAGAAAAAGCACCACAAGCTAAAAAGCACGACCGCAAG GGCGTCAAGCCGGAAAAACGTCAGTCGCCTGAAACGGATATGGCTGCTAAGCTAGCTGCACTGAAAAGCAAATTTTCTTA A Protein sequence : MLTHEQRIAGDLSLNDRQVRTTIQLLDEGATVPFISRYRKELTGSLDEIQVAAIRDRIGQLRDLDKRREAIIKSLTELGK LSPELQSKLEEAETMAVLEDIYLPYKPKRKTRASVAREKGLEPLADWLLKQEQSSVEDFAATFVNDEKGVSSVEEALAGA RDILAETIAEHAETRAQMRDFFMENGSFASRVVPGKEEEAIKYKDYYEWTEPLKAAPSHRILAMRRGEKEQMLYLDVEVP DDEAIALIDNRFVKNASPAALQIRLAVQDSFKRLLKPSMETEVRLITRKRADEEAIRVFAENARQLLLAAPMGSKRTLAI DPGFRTGCKVVCLDEQGKLLTNTTVYPHNGTAKEAEAAHQIQLLVKQYQIEAIAIGNGTAGRETEDFVRKLQIPDVIVVM VNESGASIYSASEVAREEFPDYDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQESLADTVISCVNAV GVELNTASKQILAYVSGLGPALAQSIVEYRNQHGAFRRRADLKKVPRLGEKAFEQAAGFLRIRGAENPLDASAVHPERYA LVEEMAKDLGHEVNSLLKDEKLRKSIPLNKYVSEEVGLPTLNDILAELSKPGLDPREKFETFSFTEGVNTVNDLKVGMKL PGIVTNITNFGAFVDIGVHQDGLVHLSQMANRFIKDPNEVVKVHQQVEVTVIEVDANRNRISLSMKTEEKAPQAKKHDRK GVKPEKRQSPETDMAAKLAALKSKFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-154 | 50 |
