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Name : Sph21_2410 (Sph21_2410) Accession : YP_004317634.1 Strain : Sphingobacterium sp. 21 Genome accession: NC_015277 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2980138 - 2981856 bp Length : 1719 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: lysyl-tRNA synthetase, class II; HAMAP: lysyl-tRNA synthetase, class II; KEGG: phe:Phep_1559 lysyl-tRNA synthetase DNA sequence : ATGAGCAGCATTTTATCAGAACAGGAAGTATTGCGCCGACAGGCTTTAGATCAATTGATCCAATTAGGAATAGAACCTTA TCCTGCAGAGGCATTTGACATTAATGCTAACGCACGGGACATCCATGAAAATTATGATCGCGACAAGCTGAATTATAAAA ATATTAGTATTGCAGGTCGTATGATGAGTAGGCGAGTGATGGGAAGTGCTTCTTTCTTTGAACTTCAAGATTCGACAGGT CGTATTCAGGTTTATCTGACAAGAGATGAGCTTTGCCCCACCGAGGATAAAACATTATATAACACCGTCTTTAAAAAATT ATTGGATATTGGAGATTTTGTTGGTGTAAAGGGACACGTTTTTACAACGCAGACCGGAACAATATCCATTCATGCAACTG AATTGACATTGCTAGCAAAATCGCTGAAACCTCTGCCGATAGTTAAGGAAGCAGACGGAAAAGTGTTCGATGCCGTAACC GATCCTGAATTTCGCTATAGACAACGTTACGTTGATTTAGTAGTAAATCCGCACGTTCGAGAAACGTTCACCAAAGTAAC TAAAATCAAATCTGCCATAAGGCAATTTTTGGATGAACAGGGCGCCATTGAAGTAGACACACCGGTATTACAAAGTATAC CGGGCGGTGCTGCTGCAAGACCGTTTATTACGCATCATAACGCACTTGACATCCCGTTATATTTACGGATAGCCAATGAG CTGTATTTAAAGCGCTTAATCGTTGGCGGCTACGATTGGGTGTATGAATTCAGCAGAAACTTTCGCAATGAAGGAATGGA CCGAACCCATAATCCTGAATTTACGGTACTCGAATTCTATGTGGCATACAAAGATTACCTATGGATGATGGACATCACAG AGCAGCTCTTCGAGAAGGTGGCGCTAGCTACAAACGGAAAGACCACCATAACGGTTGGCGATAAGGAAATTAACTTTGCA GCTCCCTATAAACGGATCAGCATATATGATGCAATAAAAGAGCATGCAGGCTTTGACGTTTCAGGCTTAGATGAGGTGGG ATTACGGGATGTATGCAAGCAGCTTCATATCCCGGTAGATGAAAGCATGGGTAAGGGAAAGCTTATTGACGAGATATTTG GTGAAAAATGTGAGCATCATTTTATTCAACCCACATTTATTATTGATTATCCGGTAGAGATGAGTCCTTTAACGAAGAAA CATCGCAGCAAGGAAGGACTTGTTGAACGTTTTGAACTCATGGTAAACGGAAAGGAATTAGCGAATGCGTATTCCGAACT TAATGATCCAATAGACCAGCTTAAGCGTTTTGAGGATCAGTTGAAGTTAATGGAGCGGGGTGATGATGAGGCGATGTTTA TTGATTACGACTTTCTAAGAGCGTTGGAATATGGCATGCCTCCTACCTCAGGAATCGGTATTGGTATTGATCGATTAGCA ATGCTGATGACCAATCAGGCAAGTATACAAGATGTGTTGTTTTTCCCACAGATGCGACCTGAGAAAGTTATCAAAACCGC TTCTGTGACTGATTACGAGGCTCAAGGAATTCCAGCTGTTTGGGTTCCTGCATTGCAGAAAATGGGACTTATCACCATTG AGTCGTTAAAAGCAGCCAATCCAAACAAAGTCTTCAATGATTTAGGCGGATTACGGAAAAAAATGAAAATTGAATCTGCC ATGCCTACGAAGGACGAGGTGATGGAATGGTTTAAATAA Protein sequence : MSSILSEQEVLRRQALDQLIQLGIEPYPAEAFDINANARDIHENYDRDKLNYKNISIAGRMMSRRVMGSASFFELQDSTG RIQVYLTRDELCPTEDKTLYNTVFKKLLDIGDFVGVKGHVFTTQTGTISIHATELTLLAKSLKPLPIVKEADGKVFDAVT DPEFRYRQRYVDLVVNPHVRETFTKVTKIKSAIRQFLDEQGAIEVDTPVLQSIPGGAAARPFITHHNALDIPLYLRIANE LYLKRLIVGGYDWVYEFSRNFRNEGMDRTHNPEFTVLEFYVAYKDYLWMMDITEQLFEKVALATNGKTTITVGDKEINFA APYKRISIYDAIKEHAGFDVSGLDEVGLRDVCKQLHIPVDESMGKGKLIDEIFGEKCEHHFIQPTFIIDYPVEMSPLTKK HRSKEGLVERFELMVNGKELANAYSELNDPIDQLKRFEDQLKLMERGDDEAMFIDYDFLRALEYGMPPTSGIGIGIDRLA MLMTNQASIQDVLFFPQMRPEKVIKTASVTDYEAQGIPAVWVPALQKMGLITIESLKAANPNKVFNDLGGLRKKMKIESA MPTKDEVMEWFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-102 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sph21_2410 | YP_004317634.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-102 | 45 |
