Gene Information

Name : Sph21_0223 (Sph21_0223)
Accession : YP_004315475.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 242436 - 243230 bp
Length : 795 bp
Strand : +
Note : PFAM: Cation efflux protein; KEGG: sat:SYN_03034 cobalt-zinc-cadmium resistance protein

DNA sequence :
ATGAAAAAATCAACTTTTGAAATAAAAAACATGGACTGTGCAGCAGAGGAGCAAATGGTCCGCATGAAATTAGACGGGGT
TGAAGAGCTTATTCACCTCGATTTTAATCTTCCGGAGAGAAAACTGATTGTGACACATACCGGAAATATCGATCGCATAG
CCATGGCCATTAAAGAGCTGAGCTTAGGGGATCGTTTCATTTCGACTGAAGAAACAGATAACACCTCGGTAGCTAGTTCT
GAGCGCGAAGAACGTAAGCTACTTTTATATGTGCTGATTATCAATGCATTTTTCTTTGTACTCGAAATCATAACAGGATT
TATTTCCCATTCAATGGGGCTTGTTGCCGATAGCTTGGATATGTTAGCTGATGCACTCGTGTATGGACTCAGCTTATATG
CCGTTGGTGGGACAATCCTCCGAAAAAAGAAAATTGCAAAAGCCAGTGGATACTTTCAGATAATACTTGCTGTTTTAGGT
TTTTCGGAGGTAGTCAGACGTTTCATGGGGTTTGGAGAAACACCTGAATTTGGAATGATGGTAGTTATTTCGCTATTGGC
CTTGATTGGGAATGCGTTTTCCCTTGTAATCCTTCGCAGAACTAAGAGTAACGAGGCACACATCAAAGCTAGTCAAATAT
TTACTTCCAATGACGTAATTATAAATATTGGTGTTATGCTGGCAGGTATATTGGTTTTCATTACTGCGTCCCGTTTACCG
GACCTGATCGTTGGTACAATCGTCTTTGCTATTGTATTGAGAGGGGCGTTTCGAATATTAAATTTAGCAAAGTAA

Protein sequence :
MKKSTFEIKNMDCAAEEQMVRMKLDGVEELIHLDFNLPERKLIVTHTGNIDRIAMAIKELSLGDRFISTEETDNTSVASS
EREERKLLLYVLIINAFFFVLEIITGFISHSMGLVADSLDMLADALVYGLSLYAVGGTILRKKKIAKASGYFQIILAVLG
FSEVVRRFMGFGETPEFGMMVVISLLALIGNAFSLVILRRTKSNEAHIKASQIFTSNDVIINIGVMLAGILVFITASRLP
DLIVGTIVFAIVLRGAFRILNLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 6e-49 44
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 6e-49 44
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 6e-49 44
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 5e-49 44
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 5e-49 44
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 5e-49 44
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 5e-49 44