Gene Information

Name : Sph21_2191 (Sph21_2191)
Accession : YP_004317416.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2681133 - 2683142 bp
Length : 2010 bp
Strand : +
Note : SMART: transketolase-like, pyrimidine-binding domain; TIGRFAM: transketolase, bacterial-like; KEGG: sli:Slin_2594 transketolase; PFAM: transketolase, N-terminal; transketolase-like, pyrimidine-binding domain; transketolase, C-terminal

DNA sequence :
ATGACTAAAGAAAACAGTAACCCCTTAGACGGACTGAGTGTTAACACCATCCGTTTCCTGGCGACCGATATGGTGCAACA
GGCAAATTCGGGCCATCCCGGGCTTCCGCTGGGAGCCGCGCCCATGGCATATGTTTTATGGAATCGTTTTCTGCGGTTTA
ATCCGAAAGATCCTAAATGGCCGAATCGCGACCGCTTCATCCTTTCTGCCGGCCACGGCTCGGCATTATTGTACAGTTTA
TTGCATTTATACGGATATGATCTGCCGCTGACTGAACTGCAACACTTTCGGCAACTGGGATCAAAAACACCCGGCCATCC
GGAATCGGTGTTGACTCCGGGAATTGAGGTGACTACCGGTCCGCTAGGGCAGGGGTTTGGAAATGGCGTGGGAATCGCTA
TTGCTGAGCGGTTTTTAGCGACGAAATACAATAAAGAGAGCTACGATTTAATAGATCATTATACCTATGCGATTGTTAGC
GACGGCGATTTAATGGAAGGGGTCGCTTCAGAGGCGGCATCTTTAGCAGGACACCTCAAGTTGGGCAAGCTTATTTATTT
ATATGATGATAATGCTATTTCCCTCGATGGGCCGACCAGTTTGGCCTTTACAGAGGATGTGCCTGCACGCTTCAGGGCTT
ATGGCTGGCAAACCTTAACGGTAGAGGATGGCAATGATCTGGATGCCATTGAGCAGGCCATTTTAGCAGCGCAGGCTGAA
ACCGAAAAACCCTCTTTAATATCCGTTAAAACGATTATCGGTTATGGCAGTCCGCAACAGGGAACGAATAAGGTACATGG
CAATCCGCTGGGTATCGAAAATCTAAAGAAAACGAAGGAGTTTTTCGGATGGGACCCGGAGAAAAACTTTTTTATACCGG
AAGAAGTGAGCGATTACCTTTTGGGCCGAGGACAAAAAGGAGCTGAATTGCAACAGGCATGGAACGAGCAATTTACATCT
TATAAAGTAGTTTTTGAAGCAGAAGCGAAGGATCTTGAAATTAGCTTTGAAGGTGAATTGCCAGCGGGCTGGGATAATGG
GATGCCTACTTTCAATGCCGGGGATGCGCTAGCAACAAGAGAGGCTTCGGGAAAGGTATTGGAAGTATTGCGCCAAAACA
TAAGCTGGTTGATTGGCGGCTCAGCGGATTTAGCAAGTTCGAACAATACGCCTGTTAAAGGAGATGAAAGTTTCCAGCCG
GGACATTACGACTTACGCAACATTTGGTTTGGTGTCCGCGAACACGGTATGGGCGCAATATTAAATGGTATGGCCTCTTA
CGGGGGTACGCGTGTCTATGGCGGTACCTTTTTGACATTTTCGGATTATATGCGAGGAGCCATTCGTTTGGCAGCCTTAA
CGAAAGCACCGGTCACCTATATATTTACGCATGATAGTGTTGCCTTAGGTGAGGATGGCCCTACGCATCAGTCGGTTGAA
CATGTTTCGGCTTTGCGGTTAATCCCCAACTTGACGGTCATACGGCCGGCAGACGCTTTTGAGACGATAGCGGCCTGGAA
AGTTGCTATGAGTCGACTAAAGGGGCCGGTAGCACTCATCTTGTCGCGACAGAAGTTACCGGTTATCGATCAGCAGCGTT
ACGCTTCCGGCGATAACTTAAGCAAAGGCGGCTATGTCTTAAGTGACACCGATGGTACCCCTGATATTATTCTTATAGCC
ACGGGGTCGGAGGTGCAACTCGTTTTAGAAGCGCAAGAGCAACTGACGAAGGAAGGCATTGGCGCCAGGGTTGTCAGTAT
GCCTTCCTTTGAACTGTTTAATCAACAGGATCAGGCCTATCGTGAGCAGGTTCTGCCACCTCATGTGGCCAAACGGTTAG
CCGTGGAAGCAGGTGTGACGCCACTATGGTATCAGTATGTTGGTGCAGACGGAGATGTAATAGGCATCGATACCTTCGGT
GAATCGGGTGAAGGCAAAGCGGTGATGACACATTTTGGTTTTACTGCCAGGCATGTTTACGATCGAGCCCTTAAGTTGTT
GAAACGTTGA

Protein sequence :
MTKENSNPLDGLSVNTIRFLATDMVQQANSGHPGLPLGAAPMAYVLWNRFLRFNPKDPKWPNRDRFILSAGHGSALLYSL
LHLYGYDLPLTELQHFRQLGSKTPGHPESVLTPGIEVTTGPLGQGFGNGVGIAIAERFLATKYNKESYDLIDHYTYAIVS
DGDLMEGVASEAASLAGHLKLGKLIYLYDDNAISLDGPTSLAFTEDVPARFRAYGWQTLTVEDGNDLDAIEQAILAAQAE
TEKPSLISVKTIIGYGSPQQGTNKVHGNPLGIENLKKTKEFFGWDPEKNFFIPEEVSDYLLGRGQKGAELQQAWNEQFTS
YKVVFEAEAKDLEISFEGELPAGWDNGMPTFNAGDALATREASGKVLEVLRQNISWLIGGSADLASSNNTPVKGDESFQP
GHYDLRNIWFGVREHGMGAILNGMASYGGTRVYGGTFLTFSDYMRGAIRLAALTKAPVTYIFTHDSVALGEDGPTHQSVE
HVSALRLIPNLTVIRPADAFETIAAWKVAMSRLKGPVALILSRQKLPVIDQQRYASGDNLSKGGYVLSDTDGTPDIILIA
TGSEVQLVLEAQEQLTKEGIGARVVSMPSFELFNQQDQAYREQVLPPHVAKRLAVEAGVTPLWYQYVGADGDVIGIDTFG
ESGEGKAVMTHFGFTARHVYDRALKLLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-142 49
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-142 48